Protein–RNA interactions for Protein: Q12472

TY2B-DR1, Transposon Ty2-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-DR1Q12472 ART10YLR392C 1557 nt2.09□□□□□ -2.07
TY2B-DR1Q12472 UBX3YDL091C 1368 nt2.09□□□□□ -2.07
TY2B-DR1Q12472 CTK2YJL006C 972 nt2.09□□□□□ -2.07
TY2B-DR1Q12472 HRI1YLR301W 735 nt2.09□□□□□ -2.07
TY2B-DR1Q12472 DOP1YDR141C 5097 nt2.09□□□□□ -2.07
TY2B-DR1Q12472 NOP6YDL213C 678 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 YAE1YJR067C 426 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 ISF1YMR081C 1017 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 RPB11YOL005C 363 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 PEX5YDR244W 1839 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 ATG32YIL146C 1590 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 YLR422WYLR422W 5799 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 MRP10YDL045W-A 288 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 ALB1YJL122W 528 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 NDL1YLR254C 570 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 YBL073WYBL073W 312 nt2.08□□□□□ -2.08
TY2B-DR1Q12472 RGA2YDR379W 3030 nt2.07□□□□□ -2.08
TY2B-DR1Q12472 RRP14YKL082C 1305 nt2.07□□□□□ -2.08
TY2B-DR1Q12472 SEC3YER008C 4011 nt2.07□□□□□ -2.08
TY2B-DR1Q12472 VPS54YDR027C 2670 nt2.07□□□□□ -2.08
TY2B-DR1Q12472 YGR109W-BYGR109W-B 4644 nt2.07□□□□□ -2.08
TY2B-DR1Q12472 YDL199CYDL199C 2064 nt2.07□□□□□ -2.08
TY2B-DR1Q12472 SYH1YPL105C 2550 nt2.06□□□□□ -2.08
TY2B-DR1Q12472 SNL1YIL016W 480 nt2.06□□□□□ -2.08
TY2B-DR1Q12472 PLC1YPL268W 2610 nt2.06□□□□□ -2.08
TY2B-DR1Q12472 EPO1YMR124W 2832 nt2.06□□□□□ -2.08
TY2B-DR1Q12472 YIL142C-AYIL142C-A 333 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 CNS1YBR155W 1158 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 CLB4YLR210W 1383 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 SNF11YDR073W 510 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 MTR2YKL186C 555 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 ERG29YMR134W 714 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 TPO5YKL174C 1857 nt2.05□□□□□ -2.08
TY2B-DR1Q12472 RIC1YLR039C 3171 nt2.04□□□□□ -2.08
TY2B-DR1Q12472 LHS1YKL073W 2646 nt2.04□□□□□ -2.08
TY2B-DR1Q12472 AGC1YPR021C 2709 nt2.04□□□□□ -2.08
TY2B-DR1Q12472 FOL3YMR113W 1284 nt2.04□□□□□ -2.08
TY2B-DR1Q12472 HOS4YIL112W 3252 nt2.03□□□□□ -2.08
TY2B-DR1Q12472 EAF5YEL018W 840 nt2.03□□□□□ -2.08
TY2B-DR1Q12472 YIR014WYIR014W 729 nt2.03□□□□□ -2.08
TY2B-DR1Q12472 ARR2YPR200C 393 nt2.03□□□□□ -2.08
TY2B-DR1Q12472 VPS3YDR495C 3036 nt2.03□□□□□ -2.08
TY2B-DR1Q12472 SLM1YIL105C 2061 nt2.03□□□□□ -2.09
TY2B-DR1Q12472 YHR180W-AYHR180W-A 183 nt2.03□□□□□ -2.09
TY2B-DR1Q12472 INA22YIR024C 651 nt2.03□□□□□ -2.09
TY2B-DR1Q12472 SHE9YDR393W 1371 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 MLP2YIL149C 5040 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 UTP5YDR398W 1932 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 RIF1YBR275C 5751 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 YPR097WYPR097W 3222 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 YEL032C-AYEL032C-A 162 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 YLR154W-AYLR154W-A 186 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 INA17YPL099C 549 nt2.02□□□□□ -2.09
TY2B-DR1Q12472 MDM32YOR147W 1869 nt2.01□□□□□ -2.09
TY2B-DR1Q12472 SRD1YCR018C 666 nt2.01□□□□□ -2.09
TY2B-DR1Q12472 CDC73YLR418C 1182 nt2.01□□□□□ -2.09
TY2B-DR1Q12472 TSR4YOL022C 1227 nt2.01□□□□□ -2.09
TY2B-DR1Q12472 YBR196C-BYBR196C-B 105 nt2.01□□□□□ -2.09
TY2B-DR1Q12472 ALG1YBR110W 1350 nt2□□□□□ -2.09
TY2B-DR1Q12472 DAS2YDR020C 699 nt2□□□□□ -2.09
TY2B-DR1Q12472 YGR111WYGR111W 1203 nt2□□□□□ -2.09
TY2B-DR1Q12472 CSE4YKL049C 690 nt2□□□□□ -2.09
TY2B-DR1Q12472 COS3YML132W 1140 nt2□□□□□ -2.09
TY2B-DR1Q12472 COS2YBR302C 1140 nt2□□□□□ -2.09
TY2B-DR1Q12472 REV1YOR346W 2958 nt2□□□□□ -2.09
TY2B-DR1Q12472 ERP3YDL018C 678 nt1.99□□□□□ -2.09
TY2B-DR1Q12472 HPA3YEL066W 540 nt1.99□□□□□ -2.09
TY2B-DR1Q12472 KXD1YGL079W 657 nt1.99□□□□□ -2.09
TY2B-DR1Q12472 COG2YGR120C 789 nt1.99□□□□□ -2.09
TY2B-DR1Q12472 YOR289WYOR289W 756 nt1.99□□□□□ -2.09
TY2B-DR1Q12472 POL5YEL055C 3069 nt1.99□□□□□ -2.09
TY2B-DR1Q12472 SPC98YNL126W 2541 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 PET100YDR079W 336 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 RPS18AYDR450W 441 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 tQ(UUG)E2tQ(UUG)E2 72 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 GRX3YDR098C 858 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 CTH1YDR151C 978 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 SNO3YFL060C 669 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 SEN15YMR059W 387 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 SNO2YNL334C 669 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 MBA1YBR185C 837 nt1.98□□□□□ -2.09
TY2B-DR1Q12472 VPS38YLR360W 1320 nt1.97□□□□□ -2.09
TY2B-DR1Q12472 snR3snR3 194 nt1.97□□□□□ -2.09
TY2B-DR1Q12472 UFD2YDL190C 2886 nt1.96□□□□□ -2.1
TY2B-DR1Q12472 YOL166CYOL166C 339 nt1.96□□□□□ -2.1
TY2B-DR1Q12472 YDR034C-DYDR034C-D 5313 nt1.96□□□□□ -2.1
TY2B-DR1Q12472 YLR410W-BYLR410W-B 5313 nt1.96□□□□□ -2.1
TY2B-DR1Q12472 MMS22YLR320W 4365 nt1.96□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)BtF(GAA)B 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)FtF(GAA)F 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)GtF(GAA)G 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)H1tF(GAA)H1 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)H2tF(GAA)H2 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)MtF(GAA)M 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)P1tF(GAA)P1 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 tF(GAA)P2tF(GAA)P2 73 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 RRF1YHR038W 693 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 YHR214C-CYHR214C-C 1437 nt1.95□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms