Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 AC123595.1-201ENST00000440769 1046 ntBASIC19.86■□□□□ 0.77
RAE1P78406 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.86■□□□□ 0.77
RAE1P78406 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAE1P78406 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RAE1P78406 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RAE1P78406 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAE1P78406 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RAE1P78406 AP004607.4-201ENST00000530158 1459 ntBASIC19.86■□□□□ 0.77
RAE1P78406 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 AC121338.2-201ENST00000622535 1744 ntBASIC19.85■□□□□ 0.77
RAE1P78406 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RAE1P78406 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.85■□□□□ 0.77
RAE1P78406 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.85■□□□□ 0.77
RAE1P78406 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.85■□□□□ 0.77
RAE1P78406 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAE1P78406 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAE1P78406 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.85■□□□□ 0.77
RAE1P78406 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 AC138907.5-202ENST00000569484 235 ntBASIC19.85■□□□□ 0.77
RAE1P78406 TERF1P2-201ENST00000583350 1212 ntBASIC19.85■□□□□ 0.77
RAE1P78406 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.85■□□□□ 0.77
RAE1P78406 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAE1P78406 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.85■□□□□ 0.77
RAE1P78406 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAE1P78406 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAE1P78406 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAE1P78406 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAE1P78406 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.84■□□□□ 0.77
RAE1P78406 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAE1P78406 YBX1P1-201ENST00000445822 960 ntBASIC19.84■□□□□ 0.77
RAE1P78406 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.84■□□□□ 0.77
RAE1P78406 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAE1P78406 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAE1P78406 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RAE1P78406 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.84■□□□□ 0.77
RAE1P78406 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RAE1P78406 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAE1P78406 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAE1P78406 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RAE1P78406 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RAE1P78406 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.83■□□□□ 0.77
RAE1P78406 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.83■□□□□ 0.77
RAE1P78406 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.83■□□□□ 0.77
RAE1P78406 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAE1P78406 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.83■□□□□ 0.76
RAE1P78406 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAE1P78406 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.82■□□□□ 0.76
RAE1P78406 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.82■□□□□ 0.76
RAE1P78406 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.82■□□□□ 0.76
RAE1P78406 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.82■□□□□ 0.76
RAE1P78406 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAE1P78406 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAE1P78406 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RAE1P78406 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.82■□□□□ 0.76
RAE1P78406 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAE1P78406 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.81■□□□□ 0.76
RAE1P78406 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 FEM1AP1-201ENST00000431297 1995 ntBASIC19.81■□□□□ 0.76
RAE1P78406 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAE1P78406 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.81■□□□□ 0.76
RAE1P78406 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.81■□□□□ 0.76
RAE1P78406 POU5F1P4-201ENST00000413175 1085 ntBASIC19.81■□□□□ 0.76
RAE1P78406 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.81■□□□□ 0.76
RAE1P78406 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.81■□□□□ 0.76
RAE1P78406 CCDC92B-201ENST00000575506 885 ntBASIC19.81■□□□□ 0.76
RAE1P78406 AC104187.1-201ENST00000607510 612 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms