Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CNTNAP1P78357 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CNTNAP1P78357 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 KRT17P3-201ENST00000420566 1262 ntBASIC25.12■■□□□ 1.61
CNTNAP1P78357 TMPOP1-202ENST00000424642 1267 ntBASIC25.12■■□□□ 1.61
CNTNAP1P78357 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 AC243732.1-201ENST00000612648 864 ntBASIC25.12■■□□□ 1.61
CNTNAP1P78357 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CNTNAP1P78357 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CNTNAP1P78357 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.12■■□□□ 1.61
CNTNAP1P78357 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CNTNAP1P78357 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CNTNAP1P78357 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CNTNAP1P78357 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CNTNAP1P78357 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CNTNAP1P78357 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 AL591742.1-201ENST00000604433 565 ntBASIC25.11■■□□□ 1.61
CNTNAP1P78357 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CNTNAP1P78357 HLA-B-256ENST00000639848 1089 ntBASIC25.11■■□□□ 1.61
CNTNAP1P78357 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CNTNAP1P78357 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CNTNAP1P78357 AC093323.1-202ENST00000635031 2045 ntBASIC25.11■■□□□ 1.61
CNTNAP1P78357 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 AC233263.1-201ENST00000578059 224 ntBASIC25.1■■□□□ 1.61
CNTNAP1P78357 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CNTNAP1P78357 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CNTNAP1P78357 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CNTNAP1P78357 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.09■■□□□ 1.61
CNTNAP1P78357 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 LSM12P1-201ENST00000411836 588 ntBASIC25.09■■□□□ 1.61
CNTNAP1P78357 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 C2orf69P4-201ENST00000565394 541 ntBASIC25.09■■□□□ 1.61
CNTNAP1P78357 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CNTNAP1P78357 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CNTNAP1P78357 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CNTNAP1P78357 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CNTNAP1P78357 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CNTNAP1P78357 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 AC003102.1-202ENST00000563394 1796 ntBASIC25.08■■□□□ 1.61
CNTNAP1P78357 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.08■■□□□ 1.61
CNTNAP1P78357 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNTNAP1P78357 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.6
CNTNAP1P78357 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CNTNAP1P78357 RN7SL850P-201ENST00000579959 291 ntBASIC25.07■■□□□ 1.6
CNTNAP1P78357 CD177P1-201ENST00000606252 935 ntBASIC25.07■■□□□ 1.6
CNTNAP1P78357 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CNTNAP1P78357 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNTNAP1P78357 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.07■■□□□ 1.6
CNTNAP1P78357 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 RPS2P55-201ENST00000397318 883 ntBASIC25.06■■□□□ 1.6
CNTNAP1P78357 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CNTNAP1P78357 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms