Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.41■□□□□ 0.86
YBX1P67809 EEF1DP3-203ENST00000566025 782 ntBASIC20.41■□□□□ 0.86
YBX1P67809 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.41■□□□□ 0.86
YBX1P67809 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.41■□□□□ 0.86
YBX1P67809 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.41■□□□□ 0.86
YBX1P67809 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.41■□□□□ 0.86
YBX1P67809 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
YBX1P67809 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.4■□□□□ 0.86
YBX1P67809 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.4■□□□□ 0.86
YBX1P67809 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.4■□□□□ 0.86
YBX1P67809 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.4■□□□□ 0.86
YBX1P67809 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
YBX1P67809 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.39■□□□□ 0.86
YBX1P67809 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
YBX1P67809 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
YBX1P67809 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
YBX1P67809 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
YBX1P67809 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
YBX1P67809 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
YBX1P67809 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
YBX1P67809 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
YBX1P67809 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
YBX1P67809 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
YBX1P67809 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.39■□□□□ 0.85
YBX1P67809 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
YBX1P67809 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
YBX1P67809 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
YBX1P67809 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
YBX1P67809 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
YBX1P67809 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
YBX1P67809 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
YBX1P67809 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.38■□□□□ 0.85
YBX1P67809 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.38■□□□□ 0.85
YBX1P67809 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.38■□□□□ 0.85
YBX1P67809 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YBX1P67809 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.38■□□□□ 0.85
YBX1P67809 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
YBX1P67809 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.37■□□□□ 0.85
YBX1P67809 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.37■□□□□ 0.85
YBX1P67809 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.37■□□□□ 0.85
YBX1P67809 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.37■□□□□ 0.85
YBX1P67809 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.37■□□□□ 0.85
YBX1P67809 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.37■□□□□ 0.85
YBX1P67809 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
YBX1P67809 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YBX1P67809 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YBX1P67809 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YBX1P67809 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
YBX1P67809 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.36■□□□□ 0.85
YBX1P67809 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.36■□□□□ 0.85
YBX1P67809 AC053503.5-201ENST00000601508 636 ntBASIC20.36■□□□□ 0.85
YBX1P67809 IKBKGP1-201ENST00000612193 1073 ntBASIC20.36■□□□□ 0.85
YBX1P67809 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.36■□□□□ 0.85
YBX1P67809 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YBX1P67809 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
YBX1P67809 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YBX1P67809 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YBX1P67809 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
YBX1P67809 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.35■□□□□ 0.85
YBX1P67809 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
YBX1P67809 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.35■□□□□ 0.85
YBX1P67809 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YBX1P67809 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YBX1P67809 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.35■□□□□ 0.85
YBX1P67809 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.35■□□□□ 0.85
YBX1P67809 AC022517.1-201ENST00000592429 346 ntBASIC20.35■□□□□ 0.85
YBX1P67809 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
YBX1P67809 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms