Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.76□□□□□ -0.05
RPL39P62891 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 AC006455.2-201ENST00000429931 906 ntBASIC14.76□□□□□ -0.05
RPL39P62891 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RPL39P62891 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.76□□□□□ -0.05
RPL39P62891 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RPL39P62891 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.76□□□□□ -0.05
RPL39P62891 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.76□□□□□ -0.05
RPL39P62891 AL117332.1-201ENST00000622628 974 ntBASIC14.76□□□□□ -0.05
RPL39P62891 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.76□□□□□ -0.05
RPL39P62891 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RPL39P62891 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.76□□□□□ -0.05
RPL39P62891 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.76□□□□□ -0.05
RPL39P62891 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RPL39P62891 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.75□□□□□ -0.05
RPL39P62891 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 AC010997.5-201ENST00000609182 354 ntBASIC14.75□□□□□ -0.05
RPL39P62891 AC087239.1-201ENST00000622671 572 ntBASIC14.75□□□□□ -0.05
RPL39P62891 AC241377.3-202ENST00000626088 1088 ntBASIC14.75□□□□□ -0.05
RPL39P62891 AC241585.3-202ENST00000628937 1088 ntBASIC14.75□□□□□ -0.05
RPL39P62891 AC245100.8-202ENST00000629247 1058 ntBASIC14.75□□□□□ -0.05
RPL39P62891 AC068587.7-201ENST00000641602 218 ntBASIC14.75□□□□□ -0.05
RPL39P62891 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RPL39P62891 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.75□□□□□ -0.05
RPL39P62891 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
RPL39P62891 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
RPL39P62891 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.75□□□□□ -0.05
RPL39P62891 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL39P62891 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.74□□□□□ -0.05
RPL39P62891 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.74□□□□□ -0.05
RPL39P62891 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
RPL39P62891 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.74□□□□□ -0.05
RPL39P62891 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RPL39P62891 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.74□□□□□ -0.05
RPL39P62891 AC112907.3-201ENST00000577781 2400 ntBASIC14.74□□□□□ -0.05
RPL39P62891 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RPL39P62891 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPL39P62891 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RPL39P62891 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL39P62891 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL39P62891 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
RPL39P62891 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL39P62891 AC027702.1-201ENST00000563810 1770 ntBASIC14.73□□□□□ -0.05
RPL39P62891 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPL39P62891 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL39P62891 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPL39P62891 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL39P62891 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 AC010141.3-201ENST00000456659 717 ntBASIC14.73□□□□□ -0.05
RPL39P62891 AL034346.1-201ENST00000568244 1277 ntBASIC14.73□□□□□ -0.05
RPL39P62891 MIR4787-201ENST00000607364 84 ntBASIC14.73□□□□□ -0.05
RPL39P62891 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPL39P62891 AP004607.7-201ENST00000527152 1677 ntBASIC14.73□□□□□ -0.05
RPL39P62891 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL39P62891 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RPL39P62891 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.72□□□□□ -0.05
RPL39P62891 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPL39P62891 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RPL39P62891 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RPL39P62891 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL39P62891 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL39P62891 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms