Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AL589743.5-201ENST00000616611 1050 ntBASIC26.91■■□□□ 1.9
KCNQ4P56696 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
KCNQ4P56696 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.91■■□□□ 1.9
KCNQ4P56696 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
KCNQ4P56696 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
KCNQ4P56696 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
KCNQ4P56696 AC139530.1-201ENST00000575312 1977 ntBASIC26.9■■□□□ 1.9
KCNQ4P56696 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
KCNQ4P56696 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.9■■□□□ 1.9
KCNQ4P56696 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KCNQ4P56696 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
KCNQ4P56696 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KCNQ4P56696 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.9■■□□□ 1.9
KCNQ4P56696 AC100791.3-201ENST00000617619 330 ntBASIC26.9■■□□□ 1.9
KCNQ4P56696 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KCNQ4P56696 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.89■■□□□ 1.9
KCNQ4P56696 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KCNQ4P56696 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KCNQ4P56696 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KCNQ4P56696 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KCNQ4P56696 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.89■■□□□ 1.9
KCNQ4P56696 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
KCNQ4P56696 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KCNQ4P56696 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KCNQ4P56696 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
KCNQ4P56696 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KCNQ4P56696 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.88■■□□□ 1.89
KCNQ4P56696 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
KCNQ4P56696 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
KCNQ4P56696 MCRIP2P1-201ENST00000394346 511 ntBASIC26.88■■□□□ 1.89
KCNQ4P56696 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.88■■□□□ 1.89
KCNQ4P56696 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
KCNQ4P56696 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.88■■□□□ 1.89
KCNQ4P56696 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
KCNQ4P56696 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KCNQ4P56696 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.87■■□□□ 1.89
KCNQ4P56696 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.87■■□□□ 1.89
KCNQ4P56696 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KCNQ4P56696 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
KCNQ4P56696 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.87■■□□□ 1.89
KCNQ4P56696 KRT18P68-201ENST00000392293 1000 ntBASIC26.87■■□□□ 1.89
KCNQ4P56696 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
KCNQ4P56696 RPS2P55-201ENST00000397318 883 ntBASIC26.87■■□□□ 1.89
KCNQ4P56696 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KCNQ4P56696 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
KCNQ4P56696 AC107956.1-201ENST00000494359 873 ntBASIC26.87■■□□□ 1.89
KCNQ4P56696 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.87■■□□□ 1.89
KCNQ4P56696 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.87■■□□□ 1.89
KCNQ4P56696 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
KCNQ4P56696 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.87■■□□□ 1.89
KCNQ4P56696 AC133561.5-201ENST00000635547 218 ntBASIC26.87■■□□□ 1.89
KCNQ4P56696 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KCNQ4P56696 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.86■■□□□ 1.89
KCNQ4P56696 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.86■■□□□ 1.89
KCNQ4P56696 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
KCNQ4P56696 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.86■■□□□ 1.89
KCNQ4P56696 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.86■■□□□ 1.89
KCNQ4P56696 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KCNQ4P56696 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
KCNQ4P56696 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.85■■□□□ 1.89
KCNQ4P56696 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
KCNQ4P56696 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.85■■□□□ 1.89
KCNQ4P56696 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.85■■□□□ 1.89
KCNQ4P56696 AC233702.5-201ENST00000584107 538 ntBASIC26.85■■□□□ 1.89
KCNQ4P56696 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
KCNQ4P56696 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
KCNQ4P56696 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KCNQ4P56696 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.85■■□□□ 1.89
KCNQ4P56696 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.85■■□□□ 1.89
KCNQ4P56696 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.84■■□□□ 1.89
KCNQ4P56696 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 C11orf96-202ENST00000528572 1834 ntBASIC26.84■■□□□ 1.89
KCNQ4P56696 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 POM121L13P-201ENST00000422362 380 ntBASIC26.84■■□□□ 1.89
KCNQ4P56696 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.84■■□□□ 1.89
KCNQ4P56696 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
KCNQ4P56696 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
KCNQ4P56696 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.84■■□□□ 1.89
KCNQ4P56696 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.84■■□□□ 1.89
KCNQ4P56696 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KCNQ4P56696 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.83■■□□□ 1.89
KCNQ4P56696 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
KCNQ4P56696 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms