Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CMC4P56277 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CMC4P56277 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.58■□□□□ 0.08
CMC4P56277 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CMC4P56277 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.58■□□□□ 0.08
CMC4P56277 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.58■□□□□ 0.08
CMC4P56277 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.58■□□□□ 0.08
CMC4P56277 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.58■□□□□ 0.08
CMC4P56277 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.58■□□□□ 0.08
CMC4P56277 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.58■□□□□ 0.08
CMC4P56277 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 AC092666.2-201ENST00000613287 246 ntBASIC15.58■□□□□ 0.08
CMC4P56277 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.58■□□□□ 0.08
CMC4P56277 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.58■□□□□ 0.08
CMC4P56277 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CMC4P56277 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CMC4P56277 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CMC4P56277 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.57■□□□□ 0.08
CMC4P56277 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CMC4P56277 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CMC4P56277 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.57■□□□□ 0.08
CMC4P56277 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.57■□□□□ 0.08
CMC4P56277 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 UBE2DNL-204ENST00000602536 740 ntBASIC15.57■□□□□ 0.08
CMC4P56277 AC231657.2-201ENST00000624556 255 ntBASIC15.57■□□□□ 0.08
CMC4P56277 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.57■□□□□ 0.08
CMC4P56277 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CMC4P56277 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMC4P56277 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CMC4P56277 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.56■□□□□ 0.08
CMC4P56277 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CMC4P56277 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.56■□□□□ 0.08
CMC4P56277 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CMC4P56277 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 TERF1P5-201ENST00000477545 1207 ntBASIC15.56■□□□□ 0.08
CMC4P56277 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.56■□□□□ 0.08
CMC4P56277 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CMC4P56277 SLC7A5P2-201ENST00000553010 536 ntBASIC15.56■□□□□ 0.08
CMC4P56277 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.56■□□□□ 0.08
CMC4P56277 AC011767.1-201ENST00000617410 1153 ntBASIC15.56■□□□□ 0.08
CMC4P56277 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.56■□□□□ 0.08
CMC4P56277 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 AC061975.6-201ENST00000579045 1553 ntBASIC15.56■□□□□ 0.08
CMC4P56277 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CMC4P56277 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.56■□□□□ 0.08
CMC4P56277 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.56■□□□□ 0.08
CMC4P56277 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CMC4P56277 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CMC4P56277 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CMC4P56277 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMC4P56277 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CMC4P56277 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.55■□□□□ 0.08
CMC4P56277 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.55■□□□□ 0.08
CMC4P56277 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.55■□□□□ 0.08
CMC4P56277 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CMC4P56277 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.55■□□□□ 0.08
CMC4P56277 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.55■□□□□ 0.08
CMC4P56277 AC010536.3-201ENST00000620306 533 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms