Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.99■□□□□ 0.95
NUBP1P53384 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.99■□□□□ 0.95
NUBP1P53384 AL845331.1-201ENST00000424978 1190 ntBASIC20.99■□□□□ 0.95
NUBP1P53384 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.99■□□□□ 0.95
NUBP1P53384 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NUBP1P53384 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.99■□□□□ 0.95
NUBP1P53384 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.99■□□□□ 0.95
NUBP1P53384 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
NUBP1P53384 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NUBP1P53384 AC026471.5-201ENST00000615068 467 ntBASIC20.99■□□□□ 0.95
NUBP1P53384 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.99■□□□□ 0.95
NUBP1P53384 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.99■□□□□ 0.95
NUBP1P53384 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
NUBP1P53384 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NUBP1P53384 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.98■□□□□ 0.95
NUBP1P53384 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.98■□□□□ 0.95
NUBP1P53384 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.98■□□□□ 0.95
NUBP1P53384 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NUBP1P53384 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.98■□□□□ 0.95
NUBP1P53384 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.98■□□□□ 0.95
NUBP1P53384 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUBP1P53384 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.98■□□□□ 0.95
NUBP1P53384 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
NUBP1P53384 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUBP1P53384 AC022211.4-201ENST00000625094 2161 ntBASIC20.97■□□□□ 0.95
NUBP1P53384 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.97■□□□□ 0.95
NUBP1P53384 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUBP1P53384 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUBP1P53384 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
NUBP1P53384 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.97■□□□□ 0.95
NUBP1P53384 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUBP1P53384 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.97■□□□□ 0.95
NUBP1P53384 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUBP1P53384 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUBP1P53384 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
NUBP1P53384 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NUBP1P53384 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NUBP1P53384 AL139125.2-201ENST00000623134 1869 ntBASIC20.96■□□□□ 0.95
NUBP1P53384 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.96■□□□□ 0.95
NUBP1P53384 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.96■□□□□ 0.95
NUBP1P53384 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.96■□□□□ 0.95
NUBP1P53384 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUBP1P53384 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUBP1P53384 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUBP1P53384 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUBP1P53384 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUBP1P53384 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NUBP1P53384 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.95■□□□□ 0.94
NUBP1P53384 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NUBP1P53384 AP003071.4-201ENST00000562276 1284 ntBASIC20.95■□□□□ 0.94
NUBP1P53384 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC20.95■□□□□ 0.94
NUBP1P53384 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUBP1P53384 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUBP1P53384 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.95■□□□□ 0.94
NUBP1P53384 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.95■□□□□ 0.94
NUBP1P53384 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
NUBP1P53384 AL355355.2-201ENST00000442321 338 ntBASIC20.94■□□□□ 0.94
NUBP1P53384 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.94■□□□□ 0.94
NUBP1P53384 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NUBP1P53384 AC120498.8-201ENST00000614275 531 ntBASIC20.94■□□□□ 0.94
NUBP1P53384 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC20.94■□□□□ 0.94
NUBP1P53384 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.94■□□□□ 0.94
NUBP1P53384 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUBP1P53384 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
NUBP1P53384 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUBP1P53384 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUBP1P53384 KRASP1-201ENST00000407852 552 ntBASIC20.93■□□□□ 0.94
NUBP1P53384 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NUBP1P53384 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.93■□□□□ 0.94
NUBP1P53384 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUBP1P53384 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NUBP1P53384 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms