Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 tK(CUU)D1tK(CUU)D1 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)D2tK(CUU)D2 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)E1tK(CUU)E1 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)E2tK(CUU)E2 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)FtK(CUU)F 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)G1tK(CUU)G1 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)G2tK(CUU)G2 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)G3tK(CUU)G3 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)ItK(CUU)I 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)JtK(CUU)J 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)KtK(CUU)K 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)MtK(CUU)M 73 nt4.22□□□□□ -1.73
PUB1P32588 tK(CUU)PtK(CUU)P 73 nt4.22□□□□□ -1.73
PUB1P32588 YFL015CYFL015C 495 nt4.22□□□□□ -1.73
PUB1P32588 YIR014WYIR014W 729 nt4.22□□□□□ -1.73
PUB1P32588 YNL276CYNL276C 396 nt4.22□□□□□ -1.73 RIP-Chip
PUB1P32588 YBR016WYBR016W 387 nt4.22□□□□□ -1.73 RIP-Chip
PUB1P32588 snR42snR42 351 nt4.22□□□□□ -1.73
PUB1P32588 PMT6YGR199W 2280 nt4.21□□□□□ -1.73 RIP-Chip
PUB1P32588 TDA11YHR159W 1515 nt4.21□□□□□ -1.73
PUB1P32588 BI4Q0120 1917 nt4.21□□□□□ -1.74 RIP-Chip
PUB1P32588 YDR355CYDR355C 303 nt4.21□□□□□ -1.74
PUB1P32588 YFL063WYFL063W 456 nt4.21□□□□□ -1.74
PUB1P32588 YIL171WYIL171W 330 nt4.21□□□□□ -1.74
PUB1P32588 HTA2YBL003C 399 nt4.21□□□□□ -1.74 RIP-Chip
PUB1P32588 NOT5YPR072W 1683 nt4.21□□□□□ -1.74
PUB1P32588 CBP2YHL038C 1893 nt4.21□□□□□ -1.74
PUB1P32588 AKL1YBR059C 3327 nt4.21□□□□□ -1.74
PUB1P32588 YGR125WYGR125W 3111 nt4.21□□□□□ -1.74
PUB1P32588 FPK1YNR047W 2682 nt4.2□□□□□ -1.74 RIP-Chip
PUB1P32588 VPS27YNR006W 1869 nt4.2□□□□□ -1.74
PUB1P32588 SHS1YDL225W 1656 nt4.2□□□□□ -1.74
PUB1P32588 TRS65YGR166W 1683 nt4.2□□□□□ -1.74
PUB1P32588 YDR545C-AYDR545C-A 480 nt4.2□□□□□ -1.74
PUB1P32588 RGI2YIL057C 495 nt4.2□□□□□ -1.74
PUB1P32588 COA4YLR218C 453 nt4.2□□□□□ -1.74
PUB1P32588 YER158CYER158C 1722 nt4.2□□□□□ -1.74 RIP-Chip
PUB1P32588 DSN1YIR010W 1731 nt4.2□□□□□ -1.74 RIP-Chip
PUB1P32588 KAP114YGL241W 3015 nt4.2□□□□□ -1.74
PUB1P32588 KGD1YIL125W 3045 nt4.2□□□□□ -1.74 RIP-Chip
PUB1P32588 PMA1YGL008C 2757 nt4.19□□□□□ -1.74 RIP-Chip
PUB1P32588 CPS1YJL172W 1731 nt4.19□□□□□ -1.74 RIP-Chip
PUB1P32588 HSP30YCR021C 999 nt4.19□□□□□ -1.74 RIP-Chip
PUB1P32588 CPR5YDR304C 678 nt4.19□□□□□ -1.74 RIP-Chip
PUB1P32588 GRX4YER174C 735 nt4.19□□□□□ -1.74 RIP-Chip
PUB1P32588 TDA5YLR426W 981 nt4.19□□□□□ -1.74
PUB1P32588 YPR169W-AYPR169W-A 219 nt4.19□□□□□ -1.74
PUB1P32588 YPR170W-BYPR170W-B 258 nt4.19□□□□□ -1.74
PUB1P32588 YPS6YIR039C 1614 nt4.19□□□□□ -1.74
PUB1P32588 YMR196WYMR196W 3267 nt4.19□□□□□ -1.74
PUB1P32588 AEP3YPL005W 1821 nt4.18□□□□□ -1.74
PUB1P32588 YAP1802YGR241C 1707 nt4.18□□□□□ -1.74
PUB1P32588 ARX1YDR101C 1782 nt4.18□□□□□ -1.74
PUB1P32588 YDR262WYDR262W 819 nt4.18□□□□□ -1.74 RIP-Chip
PUB1P32588 ARO2YGL148W 1131 nt4.18□□□□□ -1.74
PUB1P32588 YIL066W-AYIL066W-A 444 nt4.18□□□□□ -1.74
PUB1P32588 YJR085CYJR085C 318 nt4.18□□□□□ -1.74 RIP-Chip
PUB1P32588 YAR019W-AYAR019W-A 333 nt4.18□□□□□ -1.74
PUB1P32588 RPS16AYMR143W 432 nt4.18□□□□□ -1.74 RIP-Chip
PUB1P32588 VAM10YOR068C 345 nt4.18□□□□□ -1.74
PUB1P32588 APC4YDR118W 1959 nt4.18□□□□□ -1.74
PUB1P32588 NUP2YLR335W 2163 nt4.17□□□□□ -1.74
PUB1P32588 PSE1YMR308C 3270 nt4.17□□□□□ -1.74
PUB1P32588 PHO84YML123C 1764 nt4.17□□□□□ -1.74 RIP-Chip
PUB1P32588 NDD1YOR372C 1665 nt4.17□□□□□ -1.74 RIP-Chip
PUB1P32588 IRC2YDR112W 309 nt4.17□□□□□ -1.74
PUB1P32588 RAD6YGL058W 519 nt4.17□□□□□ -1.74
PUB1P32588 ABF2YMR072W 552 nt4.17□□□□□ -1.74 RIP-Chip
PUB1P32588 YMR294W-AYMR294W-A 360 nt4.17□□□□□ -1.74
PUB1P32588 YNL146C-AYNL146C-A 195 nt4.17□□□□□ -1.74
PUB1P32588 PEX17YNL214W 600 nt4.17□□□□□ -1.74
PUB1P32588 HUB1YNR032C-A 222 nt4.17□□□□□ -1.74 RIP-Chip
PUB1P32588 DCS2YOR173W 1062 nt4.17□□□□□ -1.74
PUB1P32588 IES4YOR189W 351 nt4.17□□□□□ -1.74
PUB1P32588 YBR242WYBR242W 717 nt4.17□□□□□ -1.74 RIP-Chip
PUB1P32588 TGL3YMR313C 1929 nt4.17□□□□□ -1.74
PUB1P32588 THS1YIL078W 2205 nt4.17□□□□□ -1.74
PUB1P32588 WHI3YNL197C 1986 nt4.16□□□□□ -1.74 RIP-Chip
PUB1P32588 VAC8YEL013W 1737 nt4.16□□□□□ -1.74 RIP-Chip
PUB1P32588 YGL165CYGL165C 579 nt4.16□□□□□ -1.74
PUB1P32588 YKE2YLR200W 345 nt4.16□□□□□ -1.74
PUB1P32588 YMR105W-AYMR105W-A 195 nt4.16□□□□□ -1.74
PUB1P32588 TIR2YOR010C 756 nt4.16□□□□□ -1.74 RIP-Chip
PUB1P32588 RRD2YPL152W 1077 nt4.16□□□□□ -1.74
PUB1P32588 FEX2YPL279C 1128 nt4.16□□□□□ -1.74 RIP-Chip
PUB1P32588 YBR085C-AYBR085C-A 258 nt4.16□□□□□ -1.74
PUB1P32588 GDT1YBR187W 843 nt4.16□□□□□ -1.74 RIP-Chip
PUB1P32588 PAH1YMR165C 2589 nt4.16□□□□□ -1.74
PUB1P32588 GYP6YJL044C 1377 nt4.15□□□□□ -1.74
PUB1P32588 NOC2YOR206W 2133 nt4.15□□□□□ -1.74
PUB1P32588 BAR1YIL015W 1764 nt4.15□□□□□ -1.74
PUB1P32588 TAF12YDR145W 1620 nt4.15□□□□□ -1.74
PUB1P32588 YDR133CYDR133C 336 nt4.15□□□□□ -1.75 RIP-Chip
PUB1P32588 CAJ1YER048C 1176 nt4.15□□□□□ -1.75
PUB1P32588 OTU1YFL044C 906 nt4.15□□□□□ -1.75
PUB1P32588 RPL9BYNL067W 576 nt4.15□□□□□ -1.75 RIP-Chip
PUB1P32588 YOR146WYOR146W 306 nt4.15□□□□□ -1.75
PUB1P32588 MGR2YPL098C 342 nt4.15□□□□□ -1.75 RIP-Chip
PUB1P32588 STN1YDR082W 1485 nt4.15□□□□□ -1.75
PUB1P32588 SEC39YLR440C 2130 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 24 ms