Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 ABP140YOR239W 1887 nt4.01□□□□□ -1.77
MSH2P25847 ATP25YMR098C 1839 nt4□□□□□ -1.77
MSH2P25847 YGR027W-BYGR027W-B 5268 nt4□□□□□ -1.77
MSH2P25847 YLR227W-BYLR227W-B 5268 nt4□□□□□ -1.77
MSH2P25847 YPR158C-DYPR158C-D 5268 nt4□□□□□ -1.77
MSH2P25847 HMLALPHA2YCL067C 633 nt4□□□□□ -1.77
MSH2P25847 RPS14AYCR031C 414 nt4□□□□□ -1.77
MSH2P25847 MATALPHA2YCR039C 633 nt4□□□□□ -1.77
MSH2P25847 VMA8YEL051W 771 nt4□□□□□ -1.77
MSH2P25847 CSI2YOL007C 1026 nt4□□□□□ -1.77
MSH2P25847 ATX2YOR079C 942 nt4□□□□□ -1.77
MSH2P25847 RNR1YER070W 2667 nt4□□□□□ -1.77
MSH2P25847 TOP1YOL006C 2310 nt4□□□□□ -1.77
MSH2P25847 MAK5YBR142W 2322 nt4□□□□□ -1.77
MSH2P25847 MSH4YFL003C 2637 nt4□□□□□ -1.77
MSH2P25847 PHR1YOR386W 1698 nt4□□□□□ -1.77
MSH2P25847 YPR003CYPR003C 2265 nt4□□□□□ -1.77
MSH2P25847 NCS2YNL119W 1482 nt3.99□□□□□ -1.77
MSH2P25847 CCM1YGR150C 2595 nt3.99□□□□□ -1.77
MSH2P25847 YDL050CYDL050C 372 nt3.99□□□□□ -1.77
MSH2P25847 AIM11YER093C-A 414 nt3.99□□□□□ -1.77
MSH2P25847 RPL1BYGL135W 654 nt3.99□□□□□ -1.77
MSH2P25847 YKL162C-AYKL162C-A 153 nt3.99□□□□□ -1.77
MSH2P25847 ASI2YNL159C 870 nt3.99□□□□□ -1.77
MSH2P25847 RPL1AYPL220W 654 nt3.99□□□□□ -1.77
MSH2P25847 SKO1YNL167C 1944 nt3.99□□□□□ -1.77
MSH2P25847 KAR9YPL269W 1935 nt3.99□□□□□ -1.77
MSH2P25847 SHE4YOR035C 2370 nt3.98□□□□□ -1.77
MSH2P25847 snR59snR59 78 nt3.98□□□□□ -1.77
MSH2P25847 YDR149CYDR149C 708 nt3.98□□□□□ -1.77
MSH2P25847 PRM8YGL053W 714 nt3.98□□□□□ -1.77
MSH2P25847 YGR042WYGR042W 816 nt3.98□□□□□ -1.77
MSH2P25847 YGR161W-CYGR161W-C 279 nt3.98□□□□□ -1.77
MSH2P25847 YIL046W-AYIL046W-A 165 nt3.98□□□□□ -1.77
MSH2P25847 RPL16AYIL133C 600 nt3.98□□□□□ -1.77
MSH2P25847 YJL086CYJL086C 369 nt3.98□□□□□ -1.77
MSH2P25847 YLR252WYLR252W 306 nt3.98□□□□□ -1.77
MSH2P25847 RPL13BYMR142C 600 nt3.98□□□□□ -1.77
MSH2P25847 MRPL44YMR225C 297 nt3.98□□□□□ -1.77
MSH2P25847 YNL324WYNL324W 396 nt3.98□□□□□ -1.77
MSH2P25847 YBR062CYBR062C 543 nt3.98□□□□□ -1.77
MSH2P25847 YBR225WYBR225W 2703 nt3.98□□□□□ -1.77
MSH2P25847 YOR192C-AYOR192C-A 1317 nt3.97□□□□□ -1.77
MSH2P25847 BIK1YCL029C 1323 nt3.97□□□□□ -1.77
MSH2P25847 RGL1YPL066W 1440 nt3.97□□□□□ -1.77
MSH2P25847 YDL176WYDL176W 2127 nt3.97□□□□□ -1.77
MSH2P25847 snR56snR56 88 nt3.97□□□□□ -1.77
MSH2P25847 tC(GCA)BtC(GCA)B 72 nt3.97□□□□□ -1.77
MSH2P25847 tC(GCA)GtC(GCA)G 72 nt3.97□□□□□ -1.77
MSH2P25847 tC(GCA)P1tC(GCA)P1 72 nt3.97□□□□□ -1.77
MSH2P25847 tC(GCA)P2tC(GCA)P2 72 nt3.97□□□□□ -1.77
MSH2P25847 YHL026CYHL026C 948 nt3.97□□□□□ -1.77
MSH2P25847 YBR051WYBR051W 351 nt3.97□□□□□ -1.77
MSH2P25847 MRPL40YPL173W 894 nt3.97□□□□□ -1.77
MSH2P25847 YPR053CYPR053C 456 nt3.97□□□□□ -1.77
MSH2P25847 SCY1YGL083W 2415 nt3.97□□□□□ -1.77
MSH2P25847 FRE8YLR047C 2061 nt3.97□□□□□ -1.77
MSH2P25847 RPB2YOR151C 3675 nt3.97□□□□□ -1.77
MSH2P25847 TCB3YML072C 4638 nt3.97□□□□□ -1.77
MSH2P25847 GPI10YGL142C 1851 nt3.96□□□□□ -1.77
MSH2P25847 UBP5YER144C 2418 nt3.96□□□□□ -1.77
MSH2P25847 YEL030C-AYEL030C-A 315 nt3.96□□□□□ -1.78
MSH2P25847 RPS8BYER102W 603 nt3.96□□□□□ -1.78
MSH2P25847 PDX1YGR193C 1233 nt3.96□□□□□ -1.78
MSH2P25847 VPS51YKR020W 495 nt3.96□□□□□ -1.78
MSH2P25847 RPC37YKR025W 849 nt3.96□□□□□ -1.78
MSH2P25847 RPL15AYLR029C 615 nt3.96□□□□□ -1.78
MSH2P25847 YLR224WYLR224W 1110 nt3.96□□□□□ -1.78
MSH2P25847 PDP3YLR455W 915 nt3.96□□□□□ -1.78
MSH2P25847 EAP1YKL204W 1899 nt3.96□□□□□ -1.78
MSH2P25847 YDR338CYDR338C 2088 nt3.96□□□□□ -1.78
MSH2P25847 RAD4YER162C 2265 nt3.96□□□□□ -1.78
MSH2P25847 RPO21YDL140C 5202 nt3.95□□□□□ -1.78
MSH2P25847 YDR230WYDR230W 348 nt3.95□□□□□ -1.78
MSH2P25847 CDC26YFR036W 375 nt3.95□□□□□ -1.78
MSH2P25847 RSR1YGR152C 819 nt3.95□□□□□ -1.78
MSH2P25847 YLR076CYLR076C 423 nt3.95□□□□□ -1.78
MSH2P25847 PDS5YMR076C 3834 nt3.95□□□□□ -1.78
MSH2P25847 PDR17YNL264C 1053 nt3.95□□□□□ -1.78
MSH2P25847 PEX11YOL147C 711 nt3.95□□□□□ -1.78
MSH2P25847 YPL142CYPL142C 318 nt3.95□□□□□ -1.78
MSH2P25847 YPR145C-AYPR145C-A 237 nt3.95□□□□□ -1.78
MSH2P25847 PHO81YGR233C 3537 nt3.95□□□□□ -1.78
MSH2P25847 CWH41YGL027C 2502 nt3.94□□□□□ -1.78
MSH2P25847 USA1YML029W 2517 nt3.94□□□□□ -1.78
MSH2P25847 CIN1YOR349W 3045 nt3.94□□□□□ -1.78
MSH2P25847 SNA4YDL123W 423 nt3.94□□□□□ -1.78
MSH2P25847 YDR090CYDR090C 933 nt3.94□□□□□ -1.78
MSH2P25847 EMI1YDR512C 564 nt3.94□□□□□ -1.78
MSH2P25847 YDR537CYDR537C 606 nt3.94□□□□□ -1.78
MSH2P25847 VEL1YGL258W 621 nt3.94□□□□□ -1.78
MSH2P25847 GEP4YHR100C 558 nt3.94□□□□□ -1.78
MSH2P25847 YJR037WYJR037W 384 nt3.94□□□□□ -1.78
MSH2P25847 SYM1YLR251W 594 nt3.94□□□□□ -1.78
MSH2P25847 RIM9YMR063W 720 nt3.94□□□□□ -1.78
MSH2P25847 SFM1YOR021C 642 nt3.94□□□□□ -1.78
MSH2P25847 DER1YBR201W 636 nt3.94□□□□□ -1.78
MSH2P25847 DSF2YBR007C 2211 nt3.94□□□□□ -1.78
MSH2P25847 RAD5YLR032W 3510 nt3.94□□□□□ -1.78
MSH2P25847 CHS3YBR023C 3498 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms