Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 TDA8YAL064C-A 381 nt4.53□□□□□ -1.68
MSH3P25336 YKE2YLR200W 345 nt4.53□□□□□ -1.68
MSH3P25336 YLR364C-AYLR364C-A 123 nt4.53□□□□□ -1.68
MSH3P25336 COQ5YML110C 924 nt4.53□□□□□ -1.68
MSH3P25336 YMR158W-BYMR158W-B 321 nt4.53□□□□□ -1.68
MSH3P25336 ABP140YOR239W 1887 nt4.53□□□□□ -1.68
MSH3P25336 TGL3YMR313C 1929 nt4.52□□□□□ -1.69
MSH3P25336 SYO1YDL063C 1863 nt4.52□□□□□ -1.69
MSH3P25336 OTU1YFL044C 906 nt4.52□□□□□ -1.69
MSH3P25336 YGR121W-AYGR121W-A 216 nt4.52□□□□□ -1.69
MSH3P25336 YKL083WYKL083W 615 nt4.52□□□□□ -1.69
MSH3P25336 SIW14YNL032W 846 nt4.52□□□□□ -1.69
MSH3P25336 LYS2YBR115C 4179 nt4.52□□□□□ -1.69
MSH3P25336 HDA2YDR295C 2025 nt4.51□□□□□ -1.69
MSH3P25336 YNL284C-AYNL284C-A 1323 nt4.51□□□□□ -1.69
MSH3P25336 ALR2YFL050C 2577 nt4.51□□□□□ -1.69
MSH3P25336 SPC1YJR010C-A 285 nt4.51□□□□□ -1.69
MSH3P25336 ECM4YKR076W 1113 nt4.51□□□□□ -1.69
MSH3P25336 YBL039W-BYBL039W-B 180 nt4.51□□□□□ -1.69
MSH3P25336 YPL197CYPL197C 414 nt4.51□□□□□ -1.69
MSH3P25336 YPR016W-AYPR016W-A 261 nt4.51□□□□□ -1.69
MSH3P25336 YER077CYER077C 2067 nt4.5□□□□□ -1.69
MSH3P25336 RPP1AYDL081C 321 nt4.5□□□□□ -1.69
MSH3P25336 YDR366CYDR366C 399 nt4.5□□□□□ -1.69
MSH3P25336 YDR537CYDR537C 606 nt4.5□□□□□ -1.69
MSH3P25336 PCL5YHR071W 690 nt4.5□□□□□ -1.69
MSH3P25336 NAM2YLR382C 2685 nt4.5□□□□□ -1.69
MSH3P25336 GPI10YGL142C 1851 nt4.49□□□□□ -1.69
MSH3P25336 RSC3YDR303C 2658 nt4.49□□□□□ -1.69
MSH3P25336 SHS1YDL225W 1656 nt4.49□□□□□ -1.69
MSH3P25336 EPO1YMR124W 2832 nt4.49□□□□□ -1.69
MSH3P25336 SRP72YPL210C 1923 nt4.49□□□□□ -1.69
MSH3P25336 YCR022CYCR022C 345 nt4.49□□□□□ -1.69
MSH3P25336 SDC1YDR469W 528 nt4.49□□□□□ -1.69
MSH3P25336 SLX8YER116C 825 nt4.49□□□□□ -1.69
MSH3P25336 LIF1YGL090W 1266 nt4.49□□□□□ -1.69
MSH3P25336 YAR053WYAR053W 297 nt4.49□□□□□ -1.69
MSH3P25336 NNT1YLR285W 786 nt4.49□□□□□ -1.69
MSH3P25336 PDP3YLR455W 915 nt4.49□□□□□ -1.69
MSH3P25336 RPS16AYMR143W 432 nt4.49□□□□□ -1.69
MSH3P25336 YPL038W-AYPL038W-A 192 nt4.49□□□□□ -1.69
MSH3P25336 YBR209WYBR209W 318 nt4.49□□□□□ -1.69
MSH3P25336 MDM36YPR083W 1740 nt4.49□□□□□ -1.69
MSH3P25336 RRI2YOL117W 1938 nt4.48□□□□□ -1.69
MSH3P25336 KRE5YOR336W 4098 nt4.48□□□□□ -1.69
MSH3P25336 RNA14YMR061W 2034 nt4.48□□□□□ -1.69
MSH3P25336 ULP1YPL020C 1866 nt4.48□□□□□ -1.69
MSH3P25336 BSC3YLR465C 309 nt4.48□□□□□ -1.69
MSH3P25336 YNL057WYNL057W 333 nt4.48□□□□□ -1.69
MSH3P25336 SIL1YOL031C 1266 nt4.48□□□□□ -1.69
MSH3P25336 PEP12YOR036W 867 nt4.48□□□□□ -1.69
MSH3P25336 GDH2YDL215C 3279 nt4.48□□□□□ -1.69
MSH3P25336 ROK1YGL171W 1695 nt4.48□□□□□ -1.69
MSH3P25336 YGL140CYGL140C 3660 nt4.48□□□□□ -1.69
MSH3P25336 PEP7YDR323C 1548 nt4.47□□□□□ -1.69
MSH3P25336 SPC19YDR201W 498 nt4.47□□□□□ -1.69
MSH3P25336 COX18YGR062C 951 nt4.47□□□□□ -1.69
MSH3P25336 YJL086CYJL086C 369 nt4.47□□□□□ -1.69
MSH3P25336 OAR1YKL055C 837 nt4.47□□□□□ -1.69
MSH3P25336 YMR141CYMR141C 309 nt4.47□□□□□ -1.69
MSH3P25336 ERG2YMR202W 669 nt4.47□□□□□ -1.69
MSH3P25336 RRT16YNL105W 429 nt4.47□□□□□ -1.69
MSH3P25336 PSP1YDR505C 2526 nt4.47□□□□□ -1.69
MSH3P25336 MNR2YKL064W 2910 nt4.46□□□□□ -1.69
MSH3P25336 SSF2YDR312W 1362 nt4.46□□□□□ -1.7
MSH3P25336 EMC2YJR088C 879 nt4.46□□□□□ -1.7
MSH3P25336 ASC1YMR116C 960 nt4.46□□□□□ -1.7
MSH3P25336 INO4YOL108C 456 nt4.46□□□□□ -1.7
MSH3P25336 RPC40YPR110C 1008 nt4.46□□□□□ -1.7
MSH3P25336 ARR2YPR200C 393 nt4.46□□□□□ -1.7
MSH3P25336 DPB3YBR278W 606 nt4.46□□□□□ -1.7
MSH3P25336 SSF1YHR066W 1362 nt4.45□□□□□ -1.7
MSH3P25336 COX4YGL187C 468 nt4.45□□□□□ -1.7
MSH3P25336 ECM34YHL043W 513 nt4.45□□□□□ -1.7
MSH3P25336 YMR013C-AYMR013C-A 150 nt4.45□□□□□ -1.7
MSH3P25336 YOL134CYOL134C 390 nt4.45□□□□□ -1.7
MSH3P25336 YBR201C-AYBR201C-A 204 nt4.45□□□□□ -1.7
MSH3P25336 SIN4YNL236W 2925 nt4.45□□□□□ -1.7
MSH3P25336 FAA1YOR317W 2103 nt4.45□□□□□ -1.7
MSH3P25336 VPS9YML097C 1356 nt4.44□□□□□ -1.7
MSH3P25336 SNF2YOR290C 5112 nt4.44□□□□□ -1.7
MSH3P25336 NOP6YDL213C 678 nt4.44□□□□□ -1.7
MSH3P25336 YDR246W-AYDR246W-A 201 nt4.44□□□□□ -1.7
MSH3P25336 YKL068W-AYKL068W-A 237 nt4.44□□□□□ -1.7
MSH3P25336 SWC7YLR385C 399 nt4.44□□□□□ -1.7
MSH3P25336 YOR131CYOR131C 657 nt4.44□□□□□ -1.7
MSH3P25336 RDH54YBR073W 2877 nt4.44□□□□□ -1.7
MSH3P25336 UBP12YJL197W 3765 nt4.44□□□□□ -1.7
MSH3P25336 HRD1YOL013C 1656 nt4.44□□□□□ -1.7
MSH3P25336 KAR9YPL269W 1935 nt4.44□□□□□ -1.7
MSH3P25336 BCK2YER167W 2556 nt4.44□□□□□ -1.7
MSH3P25336 PPZ1YML016C 2079 nt4.44□□□□□ -1.7
MSH3P25336 YBR012W-AYBR012W-A 1323 nt4.44□□□□□ -1.7
MSH3P25336 YOR142W-AYOR142W-A 1323 nt4.44□□□□□ -1.7
MSH3P25336 YPR158W-AYPR158W-A 1323 nt4.44□□□□□ -1.7
MSH3P25336 MSK1YNL073W 1731 nt4.43□□□□□ -1.7
MSH3P25336 ZDS1YMR273C 2748 nt4.43□□□□□ -1.7
MSH3P25336 IRC2YDR112W 309 nt4.43□□□□□ -1.7
MSH3P25336 MIC19YFR011C 513 nt4.43□□□□□ -1.7
MSH3P25336 RPB3YIL021W 957 nt4.43□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms