Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CHMP24386 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CHMP24386 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP24386 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP24386 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP24386 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.48■□□□□ 0.71
CHMP24386 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP24386 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP24386 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP24386 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP24386 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP24386 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP24386 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP24386 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP24386 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP24386 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP24386 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHMP24386 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 DUX4L2-201ENST00000561772 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP24386 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.47■□□□□ 0.71
CHMP24386 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
CHMP24386 DUX4L6-201ENST00000626483 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 DUX4L1-201ENST00000627662 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 DUX4L8-201ENST00000629013 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 DUX4L3-201ENST00000630187 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 DUX4L7-201ENST00000630678 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 DUX4L5-201ENST00000630834 1275 ntBASIC19.47■□□□□ 0.71
CHMP24386 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.47■□□□□ 0.71
CHMP24386 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP24386 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMP24386 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP24386 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP24386 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP24386 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP24386 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP24386 AL034346.1-201ENST00000568244 1277 ntBASIC19.46■□□□□ 0.71
CHMP24386 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP24386 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP24386 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP24386 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP24386 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.45■□□□□ 0.7
CHMP24386 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP24386 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP24386 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP24386 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP24386 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP24386 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHMP24386 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP24386 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP24386 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP24386 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP24386 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP24386 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP24386 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.44■□□□□ 0.7
CHMP24386 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP24386 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP24386 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CHMP24386 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
CHMP24386 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms