Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSR1P21757 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.45■□□□□ 0.54
MSR1P21757 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSR1P21757 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.45■□□□□ 0.54
MSR1P21757 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSR1P21757 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.44■□□□□ 0.54
MSR1P21757 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MSR1P21757 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.44■□□□□ 0.54
MSR1P21757 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.44■□□□□ 0.54
MSR1P21757 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.44■□□□□ 0.54
MSR1P21757 TERF1P2-201ENST00000583350 1212 ntBASIC18.44■□□□□ 0.54
MSR1P21757 AC008175.2-201ENST00000612840 297 ntBASIC18.44■□□□□ 0.54
MSR1P21757 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.44■□□□□ 0.54
MSR1P21757 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.44■□□□□ 0.54
MSR1P21757 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.44■□□□□ 0.54
MSR1P21757 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
MSR1P21757 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.44■□□□□ 0.54
MSR1P21757 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSR1P21757 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.44■□□□□ 0.54
MSR1P21757 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.43■□□□□ 0.54
MSR1P21757 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.43■□□□□ 0.54
MSR1P21757 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.43■□□□□ 0.54
MSR1P21757 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.43■□□□□ 0.54
MSR1P21757 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.43■□□□□ 0.54
MSR1P21757 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
MSR1P21757 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSR1P21757 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.43■□□□□ 0.54
MSR1P21757 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.43■□□□□ 0.54
MSR1P21757 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSR1P21757 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.42■□□□□ 0.54
MSR1P21757 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
MSR1P21757 AP004607.4-201ENST00000530158 1459 ntBASIC18.42■□□□□ 0.54
MSR1P21757 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.42■□□□□ 0.54
MSR1P21757 POU5F1P4-201ENST00000413175 1085 ntBASIC18.42■□□□□ 0.54
MSR1P21757 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.42■□□□□ 0.54
MSR1P21757 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.42■□□□□ 0.54
MSR1P21757 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.42■□□□□ 0.54
MSR1P21757 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.42■□□□□ 0.54
MSR1P21757 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MSR1P21757 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.42■□□□□ 0.54
MSR1P21757 CCDC92B-201ENST00000575506 885 ntBASIC18.42■□□□□ 0.54
MSR1P21757 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSR1P21757 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
MSR1P21757 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSR1P21757 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.42■□□□□ 0.54
MSR1P21757 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.42■□□□□ 0.54
MSR1P21757 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.42■□□□□ 0.54
MSR1P21757 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MSR1P21757 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MSR1P21757 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MSR1P21757 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MSR1P21757 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.41■□□□□ 0.54
MSR1P21757 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.41■□□□□ 0.54
MSR1P21757 AC138907.5-202ENST00000569484 235 ntBASIC18.41■□□□□ 0.54
MSR1P21757 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSR1P21757 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.41■□□□□ 0.54
MSR1P21757 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSR1P21757 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSR1P21757 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MSR1P21757 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MSR1P21757 AC061975.6-201ENST00000579045 1553 ntBASIC18.4■□□□□ 0.54
MSR1P21757 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.4■□□□□ 0.54
MSR1P21757 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.4■□□□□ 0.54
MSR1P21757 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.4■□□□□ 0.54
MSR1P21757 KRT18P14-201ENST00000534205 1250 ntBASIC18.4■□□□□ 0.54
MSR1P21757 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.4■□□□□ 0.54
MSR1P21757 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.4■□□□□ 0.54
MSR1P21757 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSR1P21757 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MSR1P21757 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MSR1P21757 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MSR1P21757 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.39■□□□□ 0.54
MSR1P21757 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.39■□□□□ 0.53
MSR1P21757 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.39■□□□□ 0.53
MSR1P21757 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MSR1P21757 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSR1P21757 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MSR1P21757 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSR1P21757 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.39■□□□□ 0.53
MSR1P21757 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MSR1P21757 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms