Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NELFEP18615 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.58■□□□□ 0.89
NELFEP18615 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.58■□□□□ 0.89
NELFEP18615 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NELFEP18615 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NELFEP18615 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NELFEP18615 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFEP18615 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFEP18615 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFEP18615 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFEP18615 KRT18P11-201ENST00000435214 1283 ntBASIC20.57■□□□□ 0.88
NELFEP18615 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NELFEP18615 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NELFEP18615 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.57■□□□□ 0.88
NELFEP18615 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NELFEP18615 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
NELFEP18615 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 AL034346.1-201ENST00000568244 1277 ntBASIC20.56■□□□□ 0.88
NELFEP18615 BID-214ENST00000617586 542 ntTSL 5 BASIC20.56■□□□□ 0.88
NELFEP18615 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.56■□□□□ 0.88
NELFEP18615 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.56■□□□□ 0.88
NELFEP18615 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFEP18615 AC087742.1-201ENST00000575880 1738 ntBASIC20.56■□□□□ 0.88
NELFEP18615 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 AC104187.1-201ENST00000607510 612 ntBASIC20.55■□□□□ 0.88
NELFEP18615 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.55■□□□□ 0.88
NELFEP18615 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NELFEP18615 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFEP18615 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NELFEP18615 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.54■□□□□ 0.88
NELFEP18615 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
NELFEP18615 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.54■□□□□ 0.88
NELFEP18615 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.54■□□□□ 0.88
NELFEP18615 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.54■□□□□ 0.88
NELFEP18615 AL157384.1-201ENST00000445995 2473 ntBASIC20.54■□□□□ 0.88
NELFEP18615 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NELFEP18615 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NELFEP18615 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFEP18615 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
NELFEP18615 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.53■□□□□ 0.88
NELFEP18615 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 CDCA4P2-201ENST00000441182 718 ntBASIC20.53■□□□□ 0.88
NELFEP18615 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.53■□□□□ 0.88
NELFEP18615 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.53■□□□□ 0.88
NELFEP18615 RAP2CP1-201ENST00000605103 478 ntBASIC20.53■□□□□ 0.88
NELFEP18615 AC073111.5-205ENST00000641717 521 ntBASIC20.53■□□□□ 0.88
NELFEP18615 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NELFEP18615 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NELFEP18615 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NELFEP18615 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NELFEP18615 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
NELFEP18615 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.52■□□□□ 0.88
NELFEP18615 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NELFEP18615 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.52■□□□□ 0.88
NELFEP18615 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.52■□□□□ 0.88
NELFEP18615 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms