Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.9■□□□□ 0.94
THRAP10827 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THRAP10827 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.89■□□□□ 0.94
THRAP10827 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
THRAP10827 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
THRAP10827 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
THRAP10827 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
THRAP10827 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
THRAP10827 AC016769.1-201ENST00000409132 1010 ntBASIC20.89■□□□□ 0.93
THRAP10827 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THRAP10827 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
THRAP10827 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.89■□□□□ 0.93
THRAP10827 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
THRAP10827 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.88■□□□□ 0.93
THRAP10827 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THRAP10827 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THRAP10827 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THRAP10827 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.88■□□□□ 0.93
THRAP10827 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.88■□□□□ 0.93
THRAP10827 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.88■□□□□ 0.93
THRAP10827 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.88■□□□□ 0.93
THRAP10827 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.88■□□□□ 0.93
THRAP10827 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THRAP10827 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.88■□□□□ 0.93
THRAP10827 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THRAP10827 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 LINC01521-201ENST00000504184 1943 ntBASIC20.87■□□□□ 0.93
THRAP10827 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
THRAP10827 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
THRAP10827 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.87■□□□□ 0.93
THRAP10827 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.87■□□□□ 0.93
THRAP10827 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.87■□□□□ 0.93
THRAP10827 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.87■□□□□ 0.93
THRAP10827 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.87■□□□□ 0.93
THRAP10827 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.87■□□□□ 0.93
THRAP10827 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.87■□□□□ 0.93
THRAP10827 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THRAP10827 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.86■□□□□ 0.93
THRAP10827 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 AF106564.1-201ENST00000607058 2553 ntBASIC20.86■□□□□ 0.93
THRAP10827 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
THRAP10827 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.86■□□□□ 0.93
THRAP10827 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
THRAP10827 AC080038.1-201ENST00000611274 1154 ntBASIC20.86■□□□□ 0.93
THRAP10827 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
THRAP10827 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
THRAP10827 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
THRAP10827 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THRAP10827 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.85■□□□□ 0.93
THRAP10827 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.85■□□□□ 0.93
THRAP10827 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.85■□□□□ 0.93
THRAP10827 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.85■□□□□ 0.93
THRAP10827 ID1-201ENST00000376105 1233 ntBASIC20.85■□□□□ 0.93
THRAP10827 KRT19P1-201ENST00000405746 1186 ntBASIC20.85■□□□□ 0.93
THRAP10827 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.85■□□□□ 0.93
THRAP10827 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.85■□□□□ 0.93
THRAP10827 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THRAP10827 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
THRAP10827 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.84■□□□□ 0.93
THRAP10827 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
THRAP10827 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.84■□□□□ 0.93
THRAP10827 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms