Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.88■■■□□ 2.05
CSB-PGBD3P0DP91 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.88■■■□□ 2.05
CSB-PGBD3P0DP91 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CSB-PGBD3P0DP91 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.88■■■□□ 2.05
CSB-PGBD3P0DP91 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 AC092368.3-202ENST00000574180 1591 ntBASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 MCRIP2P1-201ENST00000394346 511 ntBASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CSB-PGBD3P0DP91 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 KRT17P3-201ENST00000420566 1262 ntBASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CSB-PGBD3P0DP91 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CSB-PGBD3P0DP91 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC27.85■■■□□ 2.05
CSB-PGBD3P0DP91 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC27.85■■■□□ 2.05
CSB-PGBD3P0DP91 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
CSB-PGBD3P0DP91 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
CSB-PGBD3P0DP91 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CSB-PGBD3P0DP91 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 AC093323.1-202ENST00000635031 2045 ntBASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 MFF-205ENST00000354503 1085 ntTSL 2 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
CSB-PGBD3P0DP91 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 VMO1-204ENST00000441199 741 ntTSL 2 BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC27.83■■■□□ 2.05
CSB-PGBD3P0DP91 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 KRT18P68-201ENST00000392293 1000 ntBASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 AC233263.1-201ENST00000578059 224 ntBASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 C11orf96-202ENST00000528572 1834 ntBASIC27.82■■■□□ 2.04
CSB-PGBD3P0DP91 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 AC092053.2-201ENST00000640557 1818 ntBASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 RN7SL471P-201ENST00000580476 299 ntBASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 MIR4497-201ENST00000583208 89 ntBASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CSB-PGBD3P0DP91 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 SOX15-203ENST00000570788 1093 ntBASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.8■■■□□ 2.04
CSB-PGBD3P0DP91 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 OR2A1-AS1-207ENST00000486094 819 ntBASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CSB-PGBD3P0DP91 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms