Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 PKC1YBL105C 3456 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 PMT4YJR143C 2289 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 SPC19YDR201W 498 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 YEL075CYEL075C 369 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 YER189WYER189W 369 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 YGL052WYGL052W 306 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 AYR1YIL124W 894 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 YAL059C-AYAL059C-A 423 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 YMR141W-AYMR141W-A 225 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 SNZ2YNL333W 897 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 YOR008C-AYOR008C-A 225 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 SRL1YOR247W 633 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 VIK1YPL253C 1944 nt5.2□□□□□ -1.58
TY1A-PR2P0CX60 FRS1YLR060W 1788 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 UTP15YMR093W 1542 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 YEL020C-BYEL020C-B 198 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 TMA10YLR327C 261 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 URA10YMR271C 684 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 YBL073WYBL073W 312 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 CBF5YLR175W 1452 nt5.19□□□□□ -1.58
TY1A-PR2P0CX60 TYW1YPL207W 2433 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 MVP1YMR004W 1536 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 EAP1YKL204W 1899 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 ASI1YMR119W 1875 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 YHR139C-AYHR139C-A 312 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 YIR040CYIR040C 333 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 SCS7YMR272C 1155 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 OXP1YKL215C 3861 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 TOS3YGL179C 1683 nt5.18□□□□□ -1.58
TY1A-PR2P0CX60 ARE2YNR019W 1929 nt5.17□□□□□ -1.58
TY1A-PR2P0CX60 HOYDL227C 1761 nt5.17□□□□□ -1.58
TY1A-PR2P0CX60 snR55snR55 98 nt5.17□□□□□ -1.58
TY1A-PR2P0CX60 IRC4YDR540C 540 nt5.17□□□□□ -1.58
TY1A-PR2P0CX60 YFR056CYFR056C 369 nt5.17□□□□□ -1.58
TY1A-PR2P0CX60 SPP382YLR424W 2127 nt5.17□□□□□ -1.58
TY1A-PR2P0CX60 YSW1YBR148W 1830 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 APE3YBR286W 1614 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 SCW4YGR279C 1161 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 YLL056CYLL056C 897 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 TAR1YLR154W-C 375 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 YLR296WYLR296W 327 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 RPL26AYLR344W 384 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 ERI1YPL096C-A 207 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 ALD3YMR169C 1521 nt5.16□□□□□ -1.58
TY1A-PR2P0CX60 ICR1ICR1 3199 nt5.15□□□□□ -1.58
TY1A-PR2P0CX60 IMA1YGR287C 1770 nt5.15□□□□□ -1.58
TY1A-PR2P0CX60 YEL014CYEL014C 306 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 YER066C-AYER066C-A 501 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 ALG13YGL047W 609 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 PET191YJR034W 327 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 TVP18YMR071C 504 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 YPL238CYPL238C 390 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 CTR86YCR054C 1692 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 ECM32YER176W 3366 nt5.15□□□□□ -1.59
TY1A-PR2P0CX60 CPS1YJL172W 1731 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 RKM1YPL208W 1752 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 LPP1YDR503C 825 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 YIL141WYIL141W 390 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 RPL16BYNL069C 597 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 YBR064WYBR064W 429 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 DBF4YDR052C 2115 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 DAK1YML070W 1755 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 EIS1YMR031C 2532 nt5.14□□□□□ -1.59
TY1A-PR2P0CX60 HOP1YIL072W 1818 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 SPC72YAL047C 1869 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 PHO87YCR037C 2772 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 PDC1YLR044C 1692 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 SRC1YML034W 2505 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 IDP1YDL066W 1287 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 RPS5YJR123W 678 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 PRE8YML092C 753 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 YBR197CYBR197C 654 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 FKH2YNL068C 2589 nt5.13□□□□□ -1.59
TY1A-PR2P0CX60 PSP1YDR505C 2526 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 YDL062WYDL062W 426 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 YET3YDL072C 612 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 TRR2YHR106W 1029 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 YLR230WYLR230W 306 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 YBR201C-AYBR201C-A 204 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 ABZ1YNR033W 2364 nt5.12□□□□□ -1.59
TY1A-PR2P0CX60 CEP3YMR168C 1827 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 QDR3YBR043C 2070 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 KKQ8YKL168C 2175 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 YDR053WYDR053W 396 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 ERG28YER044C 447 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 PSY1YKL076C 384 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 PPG1YNR032W 1107 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 YOR034C-AYOR034C-A 243 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 ISU2YOR226C 471 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 MBF1YOR298C-A 456 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 SSO1YPL232W 873 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 FRS2YFL022C 1512 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 SMP3YOR149C 1551 nt5.11□□□□□ -1.59
TY1A-PR2P0CX60 SIT4YDL047W 936 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 YDR187CYDR187C 519 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 YEL067CYEL067C 588 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP2tY(GUA)D 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP11tY(GUA)F1 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP6tY(GUA)F2 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP7tY(GUA)J1 75 nt5.1□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms