Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 HRI1YLR301W 735 nt2.09□□□□□ -2.07
TY2B-LR1P0C2J3 DOP1YDR141C 5097 nt2.09□□□□□ -2.07
TY2B-LR1P0C2J3 ISF1YMR081C 1017 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 RPB11YOL005C 363 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 PEX5YDR244W 1839 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 YLR422WYLR422W 5799 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 MRP10YDL045W-A 288 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 ALB1YJL122W 528 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 NDL1YLR254C 570 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 YBL073WYBL073W 312 nt2.08□□□□□ -2.08
TY2B-LR1P0C2J3 RGA2YDR379W 3030 nt2.07□□□□□ -2.08
TY2B-LR1P0C2J3 RRP14YKL082C 1305 nt2.07□□□□□ -2.08
TY2B-LR1P0C2J3 SEC3YER008C 4011 nt2.07□□□□□ -2.08
TY2B-LR1P0C2J3 VPS54YDR027C 2670 nt2.07□□□□□ -2.08
TY2B-LR1P0C2J3 YGR109W-BYGR109W-B 4644 nt2.07□□□□□ -2.08
TY2B-LR1P0C2J3 YDL199CYDL199C 2064 nt2.07□□□□□ -2.08
TY2B-LR1P0C2J3 SYH1YPL105C 2550 nt2.06□□□□□ -2.08
TY2B-LR1P0C2J3 SNL1YIL016W 480 nt2.06□□□□□ -2.08
TY2B-LR1P0C2J3 PLC1YPL268W 2610 nt2.06□□□□□ -2.08
TY2B-LR1P0C2J3 EPO1YMR124W 2832 nt2.06□□□□□ -2.08
TY2B-LR1P0C2J3 YIL142C-AYIL142C-A 333 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 SCP1YOR367W 603 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 CNS1YBR155W 1158 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 TFA1YKL028W 1449 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 YFR045WYFR045W 930 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 MTR2YKL186C 555 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 ERG29YMR134W 714 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 TPO5YKL174C 1857 nt2.05□□□□□ -2.08
TY2B-LR1P0C2J3 RIC1YLR039C 3171 nt2.04□□□□□ -2.08
TY2B-LR1P0C2J3 LHS1YKL073W 2646 nt2.04□□□□□ -2.08
TY2B-LR1P0C2J3 AGC1YPR021C 2709 nt2.04□□□□□ -2.08
TY2B-LR1P0C2J3 FOL3YMR113W 1284 nt2.04□□□□□ -2.08
TY2B-LR1P0C2J3 HOS4YIL112W 3252 nt2.03□□□□□ -2.08
TY2B-LR1P0C2J3 EAF5YEL018W 840 nt2.03□□□□□ -2.08
TY2B-LR1P0C2J3 YIR014WYIR014W 729 nt2.03□□□□□ -2.08
TY2B-LR1P0C2J3 ARR2YPR200C 393 nt2.03□□□□□ -2.08
TY2B-LR1P0C2J3 VPS3YDR495C 3036 nt2.03□□□□□ -2.08
TY2B-LR1P0C2J3 SLM1YIL105C 2061 nt2.03□□□□□ -2.09
TY2B-LR1P0C2J3 YHR180W-AYHR180W-A 183 nt2.03□□□□□ -2.09
TY2B-LR1P0C2J3 INA22YIR024C 651 nt2.03□□□□□ -2.09
TY2B-LR1P0C2J3 SHE9YDR393W 1371 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 MLP2YIL149C 5040 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 UTP5YDR398W 1932 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 RIF1YBR275C 5751 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 YPR097WYPR097W 3222 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 YEL032C-AYEL032C-A 162 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 YLR154W-AYLR154W-A 186 nt2.02□□□□□ -2.09
TY2B-LR1P0C2J3 MDM32YOR147W 1869 nt2.01□□□□□ -2.09
TY2B-LR1P0C2J3 SRD1YCR018C 666 nt2.01□□□□□ -2.09
TY2B-LR1P0C2J3 NOP6YDL213C 678 nt2.01□□□□□ -2.09
TY2B-LR1P0C2J3 YAE1YJR067C 426 nt2.01□□□□□ -2.09
TY2B-LR1P0C2J3 TSR4YOL022C 1227 nt2.01□□□□□ -2.09
TY2B-LR1P0C2J3 ATG32YIL146C 1590 nt2.01□□□□□ -2.09
TY2B-LR1P0C2J3 YGR111WYGR111W 1203 nt2□□□□□ -2.09
TY2B-LR1P0C2J3 CSE4YKL049C 690 nt2□□□□□ -2.09
TY2B-LR1P0C2J3 REV1YOR346W 2958 nt2□□□□□ -2.09
TY2B-LR1P0C2J3 ERP3YDL018C 678 nt1.99□□□□□ -2.09
TY2B-LR1P0C2J3 HPA3YEL066W 540 nt1.99□□□□□ -2.09
TY2B-LR1P0C2J3 KXD1YGL079W 657 nt1.99□□□□□ -2.09
TY2B-LR1P0C2J3 COG2YGR120C 789 nt1.99□□□□□ -2.09
TY2B-LR1P0C2J3 YOR289WYOR289W 756 nt1.99□□□□□ -2.09
TY2B-LR1P0C2J3 POL5YEL055C 3069 nt1.99□□□□□ -2.09
TY2B-LR1P0C2J3 SPC98YNL126W 2541 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 PET100YDR079W 336 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 tQ(UUG)E2tQ(UUG)E2 72 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 CLB4YLR210W 1383 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 GRX3YDR098C 858 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 CTH1YDR151C 978 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 SNO3YFL060C 669 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 SEN15YMR059W 387 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 SNO2YNL334C 669 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 MBA1YBR185C 837 nt1.98□□□□□ -2.09
TY2B-LR1P0C2J3 VPS38YLR360W 1320 nt1.97□□□□□ -2.09
TY2B-LR1P0C2J3 UFD2YDL190C 2886 nt1.96□□□□□ -2.1
TY2B-LR1P0C2J3 YOL166CYOL166C 339 nt1.96□□□□□ -2.1
TY2B-LR1P0C2J3 YDR034C-DYDR034C-D 5313 nt1.96□□□□□ -2.1
TY2B-LR1P0C2J3 YLR410W-BYLR410W-B 5313 nt1.96□□□□□ -2.1
TY2B-LR1P0C2J3 MMS22YLR320W 4365 nt1.96□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)BtF(GAA)B 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)FtF(GAA)F 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)GtF(GAA)G 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)H1tF(GAA)H1 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)H2tF(GAA)H2 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)MtF(GAA)M 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)P1tF(GAA)P1 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 tF(GAA)P2tF(GAA)P2 73 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 RRF1YHR038W 693 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 YHR214C-CYHR214C-C 1437 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 CDC73YLR418C 1182 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 SMP3YOR149C 1551 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 NPL4YBR170C 1743 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 HOP1YIL072W 1818 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 EAF7YNL136W 1278 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 CRS5YOR031W 210 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 CYC2YOR037W 1101 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 INA17YPL099C 549 nt1.95□□□□□ -2.1
TY2B-LR1P0C2J3 YRR1YOR162C 2433 nt1.94□□□□□ -2.1
TY2B-LR1P0C2J3 EST3YIL009C-A 546 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms