Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 MIR572-201ENST00000384983 95 ntBASIC20.59■□□□□ 0.89
RBP1P09455 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.59■□□□□ 0.89
RBP1P09455 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.59■□□□□ 0.89
RBP1P09455 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.59■□□□□ 0.89
RBP1P09455 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBP1P09455 PLK5-205ENST00000642079 1969 ntBASIC20.59■□□□□ 0.89
RBP1P09455 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBP1P09455 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBP1P09455 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBP1P09455 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RBP1P09455 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RBP1P09455 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBP1P09455 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.58■□□□□ 0.89
RBP1P09455 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.58■□□□□ 0.89
RBP1P09455 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBP1P09455 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBP1P09455 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBP1P09455 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RBP1P09455 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.58■□□□□ 0.89
RBP1P09455 AP001330.3-201ENST00000520123 633 ntBASIC20.58■□□□□ 0.89
RBP1P09455 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.58■□□□□ 0.89
RBP1P09455 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.58■□□□□ 0.89
RBP1P09455 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.58■□□□□ 0.88
RBP1P09455 AC121338.2-201ENST00000622535 1744 ntBASIC20.58■□□□□ 0.88
RBP1P09455 RASA4CP-201ENST00000424092 1398 ntBASIC20.58■□□□□ 0.88
RBP1P09455 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 LINC01006-201ENST00000333319 2292 ntBASIC20.57■□□□□ 0.88
RBP1P09455 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.57■□□□□ 0.88
RBP1P09455 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.57■□□□□ 0.88
RBP1P09455 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.57■□□□□ 0.88
RBP1P09455 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RBP1P09455 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.57■□□□□ 0.88
RBP1P09455 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.57■□□□□ 0.88
RBP1P09455 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
RBP1P09455 AL355001.2-201ENST00000620617 1191 ntBASIC20.57■□□□□ 0.88
RBP1P09455 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.57■□□□□ 0.88
RBP1P09455 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RBP1P09455 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.57■□□□□ 0.88
RBP1P09455 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RBP1P09455 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RBP1P09455 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.56■□□□□ 0.88
RBP1P09455 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.56■□□□□ 0.88
RBP1P09455 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RBP1P09455 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 SLC25A24-204ENST00000569674 2357 ntBASIC20.56■□□□□ 0.88
RBP1P09455 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RBP1P09455 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.56■□□□□ 0.88
RBP1P09455 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBP1P09455 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
RBP1P09455 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RBP1P09455 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.55■□□□□ 0.88
RBP1P09455 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.55■□□□□ 0.88
RBP1P09455 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.55■□□□□ 0.88
RBP1P09455 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBP1P09455 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
RBP1P09455 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.55■□□□□ 0.88
RBP1P09455 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.54■□□□□ 0.88
RBP1P09455 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.54■□□□□ 0.88
RBP1P09455 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.54■□□□□ 0.88
RBP1P09455 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.54■□□□□ 0.88
RBP1P09455 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
RBP1P09455 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RBP1P09455 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RBP1P09455 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBP1P09455 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RBP1P09455 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.54■□□□□ 0.88
RBP1P09455 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms