Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD48P09326 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CD48P09326 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CD48P09326 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.67■■□□□ 1.06
CD48P09326 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.67■■□□□ 1.06
CD48P09326 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD48P09326 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD48P09326 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD48P09326 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD48P09326 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.66■■□□□ 1.06
CD48P09326 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CD48P09326 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.66■■□□□ 1.06
CD48P09326 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CD48P09326 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.66■■□□□ 1.06
CD48P09326 KRT18P14-201ENST00000534205 1250 ntBASIC21.66■■□□□ 1.06
CD48P09326 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.66■■□□□ 1.06
CD48P09326 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD48P09326 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD48P09326 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD48P09326 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.66■■□□□ 1.06
CD48P09326 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD48P09326 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.65■■□□□ 1.06
CD48P09326 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CD48P09326 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD48P09326 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CD48P09326 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.65■■□□□ 1.06
CD48P09326 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CD48P09326 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CD48P09326 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.65■■□□□ 1.06
CD48P09326 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.65■■□□□ 1.06
CD48P09326 AC104187.1-201ENST00000607510 612 ntBASIC21.65■■□□□ 1.06
CD48P09326 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.65■■□□□ 1.06
CD48P09326 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD48P09326 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CD48P09326 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.65■■□□□ 1.06
CD48P09326 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD48P09326 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.64■■□□□ 1.06
CD48P09326 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.64■■□□□ 1.06
CD48P09326 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CD48P09326 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CD48P09326 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.64■■□□□ 1.05
CD48P09326 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.64■■□□□ 1.05
CD48P09326 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.64■■□□□ 1.05
CD48P09326 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.64■■□□□ 1.05
CD48P09326 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.64■■□□□ 1.05
CD48P09326 AC138907.5-202ENST00000569484 235 ntBASIC21.64■■□□□ 1.05
CD48P09326 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CD48P09326 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CD48P09326 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.64■■□□□ 1.05
CD48P09326 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD48P09326 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.64■■□□□ 1.05
CD48P09326 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CD48P09326 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CD48P09326 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
CD48P09326 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.63■■□□□ 1.05
CD48P09326 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CD48P09326 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.63■■□□□ 1.05
CD48P09326 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.63■■□□□ 1.05
CD48P09326 KRT18P61-201ENST00000585825 1298 ntBASIC21.63■■□□□ 1.05
CD48P09326 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 AP004607.4-201ENST00000530158 1459 ntBASIC21.63■■□□□ 1.05
CD48P09326 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD48P09326 AC004854.2-201ENST00000608450 1441 ntBASIC21.63■■□□□ 1.05
CD48P09326 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.63■■□□□ 1.05
CD48P09326 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.62■■□□□ 1.05
CD48P09326 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.62■■□□□ 1.05
CD48P09326 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.62■■□□□ 1.05
CD48P09326 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.62■■□□□ 1.05
CD48P09326 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD48P09326 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.62■■□□□ 1.05
CD48P09326 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CD48P09326 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.61■■□□□ 1.05
CD48P09326 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms