Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.28■■□□□ 1.16
RB1P06400 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RB1P06400 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.27■■□□□ 1.16
RB1P06400 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
RB1P06400 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.27■■□□□ 1.16
RB1P06400 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RB1P06400 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RB1P06400 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.27■■□□□ 1.16
RB1P06400 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.27■■□□□ 1.16
RB1P06400 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.27■■□□□ 1.16
RB1P06400 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RB1P06400 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
RB1P06400 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.27■■□□□ 1.16
RB1P06400 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RB1P06400 REXO1L12P-201ENST00000622156 912 ntBASIC22.27■■□□□ 1.16
RB1P06400 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RB1P06400 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.27■■□□□ 1.16
RB1P06400 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RB1P06400 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RB1P06400 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.26■■□□□ 1.15
RB1P06400 ECEL1P3-201ENST00000427961 737 ntBASIC22.26■■□□□ 1.15
RB1P06400 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RB1P06400 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.26■■□□□ 1.15
RB1P06400 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.26■■□□□ 1.15
RB1P06400 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RB1P06400 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.26■■□□□ 1.15
RB1P06400 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.25■■□□□ 1.15
RB1P06400 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.25■■□□□ 1.15
RB1P06400 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.25■■□□□ 1.15
RB1P06400 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.25■■□□□ 1.15
RB1P06400 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.25■■□□□ 1.15
RB1P06400 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
RB1P06400 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.25■■□□□ 1.15
RB1P06400 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
RB1P06400 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.25■■□□□ 1.15
RB1P06400 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RB1P06400 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RB1P06400 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.24■■□□□ 1.15
RB1P06400 FAM210CP-201ENST00000445714 574 ntBASIC22.24■■□□□ 1.15
RB1P06400 SNORA78-201ENST00000459373 127 ntBASIC22.24■■□□□ 1.15
RB1P06400 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.24■■□□□ 1.15
RB1P06400 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.24■■□□□ 1.15
RB1P06400 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.24■■□□□ 1.15
RB1P06400 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.24■■□□□ 1.15
RB1P06400 AC069544.1-201ENST00000609399 999 ntBASIC22.24■■□□□ 1.15
RB1P06400 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
RB1P06400 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RB1P06400 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.24■■□□□ 1.15
RB1P06400 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
RB1P06400 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RB1P06400 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RB1P06400 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.23■■□□□ 1.15
RB1P06400 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RB1P06400 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RB1P06400 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RB1P06400 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.23■■□□□ 1.15
RB1P06400 AC211429.1-201ENST00000415277 523 ntBASIC22.23■■□□□ 1.15
RB1P06400 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.23■■□□□ 1.15
RB1P06400 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.23■■□□□ 1.15
RB1P06400 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RB1P06400 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.23■■□□□ 1.15
RB1P06400 SOX15-203ENST00000570788 1093 ntBASIC22.23■■□□□ 1.15
RB1P06400 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RB1P06400 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.23■■□□□ 1.15
RB1P06400 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.23■■□□□ 1.15
RB1P06400 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.22■■□□□ 1.15
RB1P06400 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms