Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 HHF1YBR009C 312 nt3.88□□□□□ -1.79
CDC9P04819 YOR331CYOR331C 558 nt3.88□□□□□ -1.79
CDC9P04819 YBR051WYBR051W 351 nt3.88□□□□□ -1.79
CDC9P04819 CDC40YDR364C 1368 nt3.88□□□□□ -1.79
CDC9P04819 FMP25YLR077W 1752 nt3.87□□□□□ -1.79
CDC9P04819 EXO5YBR163W 1758 nt3.87□□□□□ -1.79
CDC9P04819 FMP10YER182W 735 nt3.87□□□□□ -1.79
CDC9P04819 AGA2YGL032C 264 nt3.87□□□□□ -1.79
CDC9P04819 SPO13YHR014W 876 nt3.87□□□□□ -1.79
CDC9P04819 ARC18YLR370C 537 nt3.87□□□□□ -1.79
CDC9P04819 SIW14YNL032W 846 nt3.87□□□□□ -1.79
CDC9P04819 YRR1YOR162C 2433 nt3.87□□□□□ -1.79
CDC9P04819 ULS1YOR191W 4860 nt3.87□□□□□ -1.79
CDC9P04819 VPS30YPL120W 1674 nt3.87□□□□□ -1.79
CDC9P04819 LCB5YLR260W 2064 nt3.86□□□□□ -1.79
CDC9P04819 CPA2YJR109C 3357 nt3.86□□□□□ -1.79
CDC9P04819 SEN1YLR430W 6696 nt3.86□□□□□ -1.79
CDC9P04819 VPS73YGL104C 1461 nt3.86□□□□□ -1.79
CDC9P04819 DSF2YBR007C 2211 nt3.86□□□□□ -1.79
CDC9P04819 NUG1YER006W 1563 nt3.86□□□□□ -1.79
CDC9P04819 RRI2YOL117W 1938 nt3.86□□□□□ -1.79
CDC9P04819 CWC2YDL209C 1020 nt3.86□□□□□ -1.79
CDC9P04819 FRQ1YDR373W 573 nt3.86□□□□□ -1.79
CDC9P04819 RPS8BYER102W 603 nt3.86□□□□□ -1.79
CDC9P04819 BI2Q0110 1272 nt3.86□□□□□ -1.79
CDC9P04819 YGR073CYGR073C 372 nt3.86□□□□□ -1.79
CDC9P04819 SOL4YGR248W 768 nt3.86□□□□□ -1.79
CDC9P04819 COX2Q0250 756 nt3.86□□□□□ -1.79
CDC9P04819 YMR001C-AYMR001C-A 231 nt3.86□□□□□ -1.79
CDC9P04819 RPL13BYMR142C 600 nt3.86□□□□□ -1.79
CDC9P04819 YPL261CYPL261C 309 nt3.86□□□□□ -1.79
CDC9P04819 RED1YLR263W 2484 nt3.86□□□□□ -1.79
CDC9P04819 YPK9YOR291W 4419 nt3.86□□□□□ -1.79
CDC9P04819 FKH2YNL068C 2589 nt3.86□□□□□ -1.79
CDC9P04819 FLO8YER109C 2400 nt3.85□□□□□ -1.79
CDC9P04819 DAL5YJR152W 1632 nt3.85□□□□□ -1.79
CDC9P04819 YAP6YDR259C 1152 nt3.85□□□□□ -1.79
CDC9P04819 YGL063C-AYGL063C-A 150 nt3.85□□□□□ -1.79
CDC9P04819 ECL1YGR146C 636 nt3.85□□□□□ -1.79
CDC9P04819 RPI1YIL119C 1224 nt3.85□□□□□ -1.79
CDC9P04819 YKL156C-AYKL156C-A 117 nt3.85□□□□□ -1.79
CDC9P04819 TOM22YNL131W 459 nt3.85□□□□□ -1.79
CDC9P04819 snR17asnR17a 333 nt3.85□□□□□ -1.79
CDC9P04819 YPL142CYPL142C 318 nt3.85□□□□□ -1.79
CDC9P04819 MRPL40YPL173W 894 nt3.85□□□□□ -1.79
CDC9P04819 ERB1YMR049C 2424 nt3.85□□□□□ -1.79
CDC9P04819 PHM7YOL084W 2976 nt3.84□□□□□ -1.79
CDC9P04819 FRE8YLR047C 2061 nt3.84□□□□□ -1.79
CDC9P04819 MIS1YBR084W 2928 nt3.84□□□□□ -1.79
CDC9P04819 IRC2YDR112W 309 nt3.84□□□□□ -1.79
CDC9P04819 CDC26YFR036W 375 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)CtQ(UUG)C 72 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)D1tQ(UUG)D1 72 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)D2tQ(UUG)D2 72 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)D3tQ(UUG)D3 72 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)E1tQ(UUG)E1 72 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)HtQ(UUG)H 72 nt3.84□□□□□ -1.79
CDC9P04819 tQ(UUG)LtQ(UUG)L 72 nt3.84□□□□□ -1.79
CDC9P04819 YAP3YHL009C 993 nt3.84□□□□□ -1.79
CDC9P04819 YKL044WYKL044W 321 nt3.84□□□□□ -1.79
CDC9P04819 YOL019W-AYOL019W-A 153 nt3.84□□□□□ -1.79
CDC9P04819 YBR076C-AYBR076C-A 267 nt3.84□□□□□ -1.79
CDC9P04819 YPR096CYPR096C 303 nt3.84□□□□□ -1.79
CDC9P04819 YBR209WYBR209W 318 nt3.84□□□□□ -1.79
CDC9P04819 ARG2YJL071W 1725 nt3.84□□□□□ -1.8
CDC9P04819 BAR1YIL015W 1764 nt3.84□□□□□ -1.8
CDC9P04819 YCR064CYCR064C 411 nt3.83□□□□□ -1.8
CDC9P04819 YIL046W-AYIL046W-A 165 nt3.83□□□□□ -1.8
CDC9P04819 NFU1YKL040C 771 nt3.83□□□□□ -1.8
CDC9P04819 FMP46YKR049C 402 nt3.83□□□□□ -1.8
CDC9P04819 YLR154W-BYLR154W-B 165 nt3.83□□□□□ -1.8
CDC9P04819 CTK3YML112W 891 nt3.83□□□□□ -1.8
CDC9P04819 snR41snR41 95 nt3.83□□□□□ -1.8
CDC9P04819 UTP15YMR093W 1542 nt3.83□□□□□ -1.8
CDC9P04819 PCK1YKR097W 1650 nt3.83□□□□□ -1.8
CDC9P04819 YNL193WYNL193W 1677 nt3.83□□□□□ -1.8
CDC9P04819 ATP25YMR098C 1839 nt3.83□□□□□ -1.8
CDC9P04819 YGR237CYGR237C 2358 nt3.83□□□□□ -1.8
CDC9P04819 GCR1YPL075W 2358 nt3.83□□□□□ -1.8
CDC9P04819 CWH41YGL027C 2502 nt3.83□□□□□ -1.8
CDC9P04819 BRE4YDL231C 3378 nt3.83□□□□□ -1.8
CDC9P04819 FLO10YKR102W 3510 nt3.83□□□□□ -1.8
CDC9P04819 TMA108YIL137C 2841 nt3.82□□□□□ -1.8
CDC9P04819 TAF7YMR227C 1773 nt3.82□□□□□ -1.8
CDC9P04819 YCF1YDR135C 4548 nt3.82□□□□□ -1.8
CDC9P04819 SSF1YHR066W 1362 nt3.82□□□□□ -1.8
CDC9P04819 OPI6YDL096C 327 nt3.82□□□□□ -1.8
CDC9P04819 SNA4YDL123W 423 nt3.82□□□□□ -1.8
CDC9P04819 EMI1YDR512C 564 nt3.82□□□□□ -1.8
CDC9P04819 YGL015CYGL015C 393 nt3.82□□□□□ -1.8
CDC9P04819 VEL1YGL258W 621 nt3.82□□□□□ -1.8
CDC9P04819 RPB3YIL021W 957 nt3.82□□□□□ -1.8
CDC9P04819 YIL171WYIL171W 330 nt3.82□□□□□ -1.8
CDC9P04819 YJL127C-BYJL127C-B 159 nt3.82□□□□□ -1.8
CDC9P04819 PDR17YNL264C 1053 nt3.82□□□□□ -1.8
CDC9P04819 ATG3YNR007C 933 nt3.82□□□□□ -1.8
CDC9P04819 YOR131CYOR131C 657 nt3.82□□□□□ -1.8
CDC9P04819 YPR050CYPR050C 414 nt3.82□□□□□ -1.8
CDC9P04819 PPZ1YML016C 2079 nt3.82□□□□□ -1.8
CDC9P04819 TAF6YGL112C 1551 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 34 ms