Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CSPG5O95196 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CSPG5O95196 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CSPG5O95196 POU5F1P4-201ENST00000413175 1085 ntBASIC22.45■■□□□ 1.18
CSPG5O95196 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.45■■□□□ 1.18
CSPG5O95196 UNC93B5-201ENST00000530315 699 ntBASIC22.45■■□□□ 1.18
CSPG5O95196 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.45■■□□□ 1.18
CSPG5O95196 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
CSPG5O95196 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSPG5O95196 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CSPG5O95196 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.44■■□□□ 1.18
CSPG5O95196 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSPG5O95196 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.44■■□□□ 1.18
CSPG5O95196 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.44■■□□□ 1.18
CSPG5O95196 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSPG5O95196 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CSPG5O95196 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSPG5O95196 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CSPG5O95196 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CSPG5O95196 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.43■■□□□ 1.18
CSPG5O95196 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.43■■□□□ 1.18
CSPG5O95196 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSPG5O95196 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CSPG5O95196 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CSPG5O95196 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSPG5O95196 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.42■■□□□ 1.18
CSPG5O95196 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSPG5O95196 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
CSPG5O95196 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSPG5O95196 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSPG5O95196 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.42■■□□□ 1.18
CSPG5O95196 AC008550.1-201ENST00000511500 884 ntBASIC22.42■■□□□ 1.18
CSPG5O95196 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.42■■□□□ 1.18
CSPG5O95196 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.42■■□□□ 1.18
CSPG5O95196 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.42■■□□□ 1.18
CSPG5O95196 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.42■■□□□ 1.18
CSPG5O95196 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CSPG5O95196 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.42■■□□□ 1.18
CSPG5O95196 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.41■■□□□ 1.18
CSPG5O95196 AC079834.2-201ENST00000609776 1949 ntBASIC22.41■■□□□ 1.18
CSPG5O95196 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CSPG5O95196 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CSPG5O95196 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.41■■□□□ 1.18
CSPG5O95196 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.41■■□□□ 1.18
CSPG5O95196 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.41■■□□□ 1.18
CSPG5O95196 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSPG5O95196 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.41■■□□□ 1.18
CSPG5O95196 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CSPG5O95196 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CSPG5O95196 KRT16P2-201ENST00000414673 1423 ntBASIC22.4■■□□□ 1.18
CSPG5O95196 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSPG5O95196 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSPG5O95196 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSPG5O95196 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.4■■□□□ 1.18
CSPG5O95196 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CSPG5O95196 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.4■■□□□ 1.18
CSPG5O95196 FAM197Y4-202ENST00000622692 608 ntBASIC22.4■■□□□ 1.18
CSPG5O95196 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSPG5O95196 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSPG5O95196 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CSPG5O95196 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSPG5O95196 AC087742.1-201ENST00000575880 1738 ntBASIC22.4■■□□□ 1.18
CSPG5O95196 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CSPG5O95196 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
CSPG5O95196 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CSPG5O95196 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSPG5O95196 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSPG5O95196 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSPG5O95196 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.39■■□□□ 1.17
CSPG5O95196 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.39■■□□□ 1.17
CSPG5O95196 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSPG5O95196 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.39■■□□□ 1.17
CSPG5O95196 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CSPG5O95196 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.39■■□□□ 1.17
CSPG5O95196 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSPG5O95196 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSPG5O95196 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSPG5O95196 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CSPG5O95196 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.38■■□□□ 1.17
CSPG5O95196 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.38■■□□□ 1.17
CSPG5O95196 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.38■■□□□ 1.17
CSPG5O95196 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSPG5O95196 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
CSPG5O95196 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms