Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
USP1O94782 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP1O94782 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP1O94782 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP1O94782 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP1O94782 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP1O94782 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.1■□□□□ 0.97
USP1O94782 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
USP1O94782 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.1■□□□□ 0.97
USP1O94782 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
USP1O94782 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
USP1O94782 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.1■□□□□ 0.97
USP1O94782 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.1■□□□□ 0.97
USP1O94782 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.1■□□□□ 0.97
USP1O94782 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP1O94782 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
USP1O94782 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USP1O94782 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
USP1O94782 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.09■□□□□ 0.97
USP1O94782 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.09■□□□□ 0.97
USP1O94782 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.09■□□□□ 0.97
USP1O94782 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.09■□□□□ 0.97
USP1O94782 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.09■□□□□ 0.97
USP1O94782 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.09■□□□□ 0.97
USP1O94782 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.09■□□□□ 0.97
USP1O94782 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP1O94782 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP1O94782 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.08■□□□□ 0.97
USP1O94782 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP1O94782 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP1O94782 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP1O94782 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP1O94782 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.08■□□□□ 0.97
USP1O94782 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.08■□□□□ 0.97
USP1O94782 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.08■□□□□ 0.97
USP1O94782 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.08■□□□□ 0.97
USP1O94782 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.08■□□□□ 0.97
USP1O94782 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP1O94782 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP1O94782 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
USP1O94782 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP1O94782 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.07■□□□□ 0.96
USP1O94782 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.07■□□□□ 0.96
USP1O94782 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
USP1O94782 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.07■□□□□ 0.96
USP1O94782 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
USP1O94782 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP1O94782 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP1O94782 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP1O94782 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP1O94782 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.07■□□□□ 0.96
USP1O94782 AL354811.1-201ENST00000610286 706 ntBASIC21.07■□□□□ 0.96
USP1O94782 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP1O94782 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP1O94782 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP1O94782 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP1O94782 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.06■□□□□ 0.96
USP1O94782 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP1O94782 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.06■□□□□ 0.96
USP1O94782 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
USP1O94782 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP1O94782 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP1O94782 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.06■□□□□ 0.96
USP1O94782 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.06■□□□□ 0.96
USP1O94782 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP1O94782 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP1O94782 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.06■□□□□ 0.96
USP1O94782 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP1O94782 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
USP1O94782 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
USP1O94782 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.05■□□□□ 0.96
USP1O94782 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP1O94782 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP1O94782 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP1O94782 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP1O94782 EEF1DP3-203ENST00000566025 782 ntBASIC21.05■□□□□ 0.96
USP1O94782 TPRG1LP1-201ENST00000598702 760 ntBASIC21.05■□□□□ 0.96
USP1O94782 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.05■□□□□ 0.96
USP1O94782 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms