Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRAMEF4O60810 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRAMEF4O60810 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF4O60810 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF4O60810 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF4O60810 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF4O60810 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF4O60810 AC010141.2-201ENST00000452426 721 ntBASIC20.14■□□□□ 0.81
PRAMEF4O60810 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF4O60810 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF4O60810 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF4O60810 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF4O60810 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PRAMEF4O60810 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF4O60810 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF4O60810 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 AC097381.1-201ENST00000429019 1296 ntBASIC20.12■□□□□ 0.81
PRAMEF4O60810 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 AC087623.3-201ENST00000607047 1098 ntBASIC20.12■□□□□ 0.81
PRAMEF4O60810 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PRAMEF4O60810 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEF4O60810 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 SLC7A5P2-201ENST00000553010 536 ntBASIC20.11■□□□□ 0.81
PRAMEF4O60810 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 AP001160.3-201ENST00000601484 763 ntBASIC20.11■□□□□ 0.81
PRAMEF4O60810 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEF4O60810 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEF4O60810 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 MIR6821-201ENST00000617625 74 ntBASIC20.1■□□□□ 0.81
PRAMEF4O60810 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.1■□□□□ 0.81
PRAMEF4O60810 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEF4O60810 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF4O60810 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF4O60810 POU5F1P4-201ENST00000413175 1085 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms