Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF11O14788 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF11O14788 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.81■□□□□ 0.6
TNFSF11O14788 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.81■□□□□ 0.6
TNFSF11O14788 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF11O14788 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF11O14788 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 Z98882.1-201ENST00000622160 2253 ntBASIC18.81■□□□□ 0.6
TNFSF11O14788 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TNFSF11O14788 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF11O14788 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF11O14788 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF11O14788 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF11O14788 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF11O14788 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF11O14788 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF11O14788 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.8■□□□□ 0.6
TNFSF11O14788 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF11O14788 SLC7A5P1-201ENST00000568957 537 ntBASIC18.8■□□□□ 0.6
TNFSF11O14788 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.8■□□□□ 0.6
TNFSF11O14788 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.8■□□□□ 0.6
TNFSF11O14788 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF11O14788 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF11O14788 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF11O14788 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF11O14788 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF11O14788 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF11O14788 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.79■□□□□ 0.6
TNFSF11O14788 AC010536.3-201ENST00000620306 533 ntBASIC18.79■□□□□ 0.6
TNFSF11O14788 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TNFSF11O14788 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF11O14788 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF11O14788 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.78■□□□□ 0.6
TNFSF11O14788 AC073111.5-205ENST00000641717 521 ntBASIC18.78■□□□□ 0.6
TNFSF11O14788 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF11O14788 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF11O14788 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF11O14788 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF11O14788 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.77■□□□□ 0.6
TNFSF11O14788 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TNFSF11O14788 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
TNFSF11O14788 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TNFSF11O14788 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF11O14788 RARRES2P11-201ENST00000635158 484 ntBASIC18.77■□□□□ 0.6
TNFSF11O14788 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
TNFSF11O14788 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF11O14788 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF11O14788 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF11O14788 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TNFSF11O14788 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF11O14788 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF11O14788 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TNFSF11O14788 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF11O14788 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF11O14788 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TNFSF11O14788 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 CDCA4P2-201ENST00000441182 718 ntBASIC18.76■□□□□ 0.59
TNFSF11O14788 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.76■□□□□ 0.59
TNFSF11O14788 DUX4L16-201ENST00000555130 1264 ntBASIC18.76■□□□□ 0.59
TNFSF11O14788 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.76■□□□□ 0.59
TNFSF11O14788 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.76■□□□□ 0.59
TNFSF11O14788 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF11O14788 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.76■□□□□ 0.59
TNFSF11O14788 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF11O14788 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms