Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC01548A6NM66 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 AC120498.10-201ENST00000621827 505 ntBASIC16.54■□□□□ 0.24
LINC01548A6NM66 AC073111.5-205ENST00000641717 521 ntBASIC16.54■□□□□ 0.24
LINC01548A6NM66 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LINC01548A6NM66 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC01548A6NM66 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.53■□□□□ 0.24
LINC01548A6NM66 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01548A6NM66 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01548A6NM66 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01548A6NM66 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01548A6NM66 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.53■□□□□ 0.24
LINC01548A6NM66 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01548A6NM66 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.53■□□□□ 0.24
LINC01548A6NM66 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LINC01548A6NM66 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01548A6NM66 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01548A6NM66 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01548A6NM66 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC01548A6NM66 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.52■□□□□ 0.24
LINC01548A6NM66 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01548A6NM66 AC090192.1-201ENST00000517740 490 ntBASIC16.52■□□□□ 0.24
LINC01548A6NM66 SLC7A5P1-201ENST00000568957 537 ntBASIC16.52■□□□□ 0.24
LINC01548A6NM66 AC010536.3-201ENST00000620306 533 ntBASIC16.52■□□□□ 0.24
LINC01548A6NM66 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LINC01548A6NM66 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01548A6NM66 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01548A6NM66 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01548A6NM66 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01548A6NM66 KRT16P2-201ENST00000414673 1423 ntBASIC16.52■□□□□ 0.23
LINC01548A6NM66 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 RAP2CP1-201ENST00000605103 478 ntBASIC16.51■□□□□ 0.23
LINC01548A6NM66 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LINC01548A6NM66 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01548A6NM66 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01548A6NM66 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01548A6NM66 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01548A6NM66 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01548A6NM66 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01548A6NM66 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01548A6NM66 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC01548A6NM66 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 AC026310.3-201ENST00000625186 2373 ntBASIC16.49■□□□□ 0.23
LINC01548A6NM66 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 TERF1P5-201ENST00000477545 1207 ntBASIC16.49■□□□□ 0.23
LINC01548A6NM66 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 AF106564.1-201ENST00000607058 2553 ntBASIC16.49■□□□□ 0.23
LINC01548A6NM66 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01548A6NM66 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms