Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 AC125437.2-201ENST00000625180 2167 ntBASIC14.81□□□□□ -0.04
LINC01546A6NGU7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01546A6NGU7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 U85056.1-201ENST00000616429 682 ntBASIC14.8□□□□□ -0.04
LINC01546A6NGU7 AC074183.2-201ENST00000623112 922 ntBASIC14.8□□□□□ -0.04
LINC01546A6NGU7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01546A6NGU7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 KRT18P60-201ENST00000312876 1297 ntBASIC14.79□□□□□ -0.04
LINC01546A6NGU7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 AC137630.3-201ENST00000607245 391 ntBASIC14.79□□□□□ -0.04
LINC01546A6NGU7 PVT1_1.1-201ENST00000615125 194 ntBASIC14.79□□□□□ -0.04
LINC01546A6NGU7 FP700111.2-201ENST00000619190 1892 ntBASIC14.79□□□□□ -0.04
LINC01546A6NGU7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01546A6NGU7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms