Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LCHNA4D1U4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LCHNA4D1U4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.55■■□□□ 1.2
LCHNA4D1U4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.54■■□□□ 1.2
LCHNA4D1U4 AC087742.1-201ENST00000575880 1738 ntBASIC22.54■■□□□ 1.2
LCHNA4D1U4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.54■■□□□ 1.2
LCHNA4D1U4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.54■■□□□ 1.2
LCHNA4D1U4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.54■■□□□ 1.2
LCHNA4D1U4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.54■■□□□ 1.2
LCHNA4D1U4 FAM21FP-204ENST00000608637 956 ntBASIC22.54■■□□□ 1.2
LCHNA4D1U4 REXO1L12P-201ENST00000622156 912 ntBASIC22.54■■□□□ 1.2
LCHNA4D1U4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCHNA4D1U4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LCHNA4D1U4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LCHNA4D1U4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LCHNA4D1U4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LCHNA4D1U4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LCHNA4D1U4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.53■■□□□ 1.2
LCHNA4D1U4 AC092368.3-202ENST00000574180 1591 ntBASIC22.53■■□□□ 1.2
LCHNA4D1U4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LCHNA4D1U4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCHNA4D1U4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCHNA4D1U4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCHNA4D1U4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCHNA4D1U4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 KRT17P3-201ENST00000420566 1262 ntBASIC22.52■■□□□ 1.2
LCHNA4D1U4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 AC010331.1-201ENST00000611423 582 ntBASIC22.52■■□□□ 1.2
LCHNA4D1U4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.52■■□□□ 1.2
LCHNA4D1U4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCHNA4D1U4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCHNA4D1U4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LCHNA4D1U4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.51■■□□□ 1.19
LCHNA4D1U4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.51■■□□□ 1.19
LCHNA4D1U4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LCHNA4D1U4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCHNA4D1U4 AC100791.3-201ENST00000617619 330 ntBASIC22.51■■□□□ 1.19
LCHNA4D1U4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCHNA4D1U4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.51■■□□□ 1.19
LCHNA4D1U4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.5■■□□□ 1.19
LCHNA4D1U4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LCHNA4D1U4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LCHNA4D1U4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LCHNA4D1U4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.5■■□□□ 1.19
LCHNA4D1U4 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.5■■□□□ 1.19
LCHNA4D1U4 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.5■■□□□ 1.19
LCHNA4D1U4 AC069544.1-201ENST00000609399 999 ntBASIC22.5■■□□□ 1.19
LCHNA4D1U4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LCHNA4D1U4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.5■■□□□ 1.19
LCHNA4D1U4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LCHNA4D1U4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LCHNA4D1U4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 AC003102.1-202ENST00000563394 1796 ntBASIC22.49■■□□□ 1.19
LCHNA4D1U4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
LCHNA4D1U4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LCHNA4D1U4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.49■■□□□ 1.19
LCHNA4D1U4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.49■■□□□ 1.19
LCHNA4D1U4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LCHNA4D1U4 SOX15-203ENST00000570788 1093 ntBASIC22.49■■□□□ 1.19
LCHNA4D1U4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.49■■□□□ 1.19
LCHNA4D1U4 AL589743.5-201ENST00000616611 1050 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms