Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 SUDS3P1-201ENST00000505831 966 ntBASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-8A0A0A6YYG3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-8A0A0A6YYG3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-8A0A0A6YYG3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 AC142381.2-201ENST00000566120 298 ntBASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 AL358852.1-201ENST00000623174 1268 ntBASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-8A0A0A6YYG3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 AC053503.5-201ENST00000601508 636 ntBASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRBV6-8A0A0A6YYG3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms