Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AC068473.5-201ENST00000616428 2072 ntBASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC35.31■■■■□ 3.24
BIVM-ERCC5R4GMW8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC35.3■■■■□ 3.24
BIVM-ERCC5R4GMW8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 MCRIP2P1-201ENST00000394346 511 ntBASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC092053.2-201ENST00000640557 1818 ntBASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
BIVM-ERCC5R4GMW8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC007322.3-201ENST00000426526 701 ntBASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC069544.1-201ENST00000609399 999 ntBASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
BIVM-ERCC5R4GMW8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 SLC29A4P2-201ENST00000504749 1089 ntBASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC105020.6-201ENST00000621523 1217 ntBASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
BIVM-ERCC5R4GMW8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 FAM99A-202ENST00000538190 1989 ntBASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 CDV3P1-201ENST00000471403 739 ntBASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC233263.1-201ENST00000578059 224 ntBASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 AP006294.2-201ENST00000641667 209 ntBASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
BIVM-ERCC5R4GMW8 AC080038.3-201ENST00000623346 1952 ntBASIC35.26■■■■□ 3.23
BIVM-ERCC5R4GMW8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
BIVM-ERCC5R4GMW8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
BIVM-ERCC5R4GMW8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC35.24■■■■□ 3.23
BIVM-ERCC5R4GMW8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
BIVM-ERCC5R4GMW8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms