Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB9Q9Y5E1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 AC007322.1-201ENST00000426983 750 ntBASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 AC010141.2-201ENST00000452426 721 ntBASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB9Q9Y5E1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 TSPY6P-201ENST00000448518 926 ntBASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 MFSD11-216ENST00000590393 1141 ntBASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB9Q9Y5E1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PCDHB9Q9Y5E1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHB9Q9Y5E1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.27■□□□□ 0.99
PCDHB9Q9Y5E1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHB9Q9Y5E1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 AC005181.1-201ENST00000604782 1256 ntBASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB9Q9Y5E1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms