Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.66■■□□□ 1.38
KDM3AQ9Y4C1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM3AQ9Y4C1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
KDM3AQ9Y4C1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM3AQ9Y4C1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
KDM3AQ9Y4C1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 NCF1B-203ENST00000435988 1254 ntBASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 AC006970.2-201ENST00000450065 779 ntBASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 AC138907.5-202ENST00000569484 235 ntBASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 AC104771.1-201ENST00000603335 964 ntBASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
KDM3AQ9Y4C1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.61■■□□□ 1.37
KDM3AQ9Y4C1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms