Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS3Q9UNS2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.62■□□□□ 0.57
COPS3Q9UNS2 PLK5-205ENST00000642079 1969 ntBASIC18.62■□□□□ 0.57
COPS3Q9UNS2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 AC133561.4-201ENST00000566112 224 ntBASIC18.61■□□□□ 0.57
COPS3Q9UNS2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPS3Q9UNS2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.6■□□□□ 0.57
COPS3Q9UNS2 AC006128.1-201ENST00000624704 1661 ntBASIC18.6■□□□□ 0.57
COPS3Q9UNS2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 BX842568.3-201ENST00000418104 571 ntBASIC18.59■□□□□ 0.57
COPS3Q9UNS2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 MIR4767-201ENST00000582827 78 ntBASIC18.59■□□□□ 0.57
COPS3Q9UNS2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms