Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 KRT18P21-201ENST00000515767 1272 ntBASIC26.96■■□□□ 1.91
CCNL1Q9UK58 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
CCNL1Q9UK58 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCNL1Q9UK58 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCNL1Q9UK58 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CCNL1Q9UK58 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.95■■□□□ 1.91
CCNL1Q9UK58 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 MCRIP2P1-201ENST00000394346 511 ntBASIC26.95■■□□□ 1.9
CCNL1Q9UK58 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CCNL1Q9UK58 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CCNL1Q9UK58 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 BX088651.1-201ENST00000540551 451 ntBASIC26.93■■□□□ 1.9
CCNL1Q9UK58 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCNL1Q9UK58 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.92■■□□□ 1.9
CCNL1Q9UK58 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CCNL1Q9UK58 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 KRT18P68-201ENST00000392293 1000 ntBASIC26.9■■□□□ 1.9
CCNL1Q9UK58 AC245052.3-201ENST00000450182 901 ntBASIC26.9■■□□□ 1.9
CCNL1Q9UK58 AC087742.1-201ENST00000575880 1738 ntBASIC26.9■■□□□ 1.9
CCNL1Q9UK58 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCNL1Q9UK58 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CCNL1Q9UK58 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CCNL1Q9UK58 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCNL1Q9UK58 AC003102.1-202ENST00000563394 1796 ntBASIC26.89■■□□□ 1.89
CCNL1Q9UK58 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.89■■□□□ 1.89
CCNL1Q9UK58 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.89■■□□□ 1.89
CCNL1Q9UK58 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CCNL1Q9UK58 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.88■■□□□ 1.89
CCNL1Q9UK58 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.88■■□□□ 1.89
CCNL1Q9UK58 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCNL1Q9UK58 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.88■■□□□ 1.89
CCNL1Q9UK58 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.88■■□□□ 1.89
CCNL1Q9UK58 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CCNL1Q9UK58 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms