Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.41■□□□□ 0.7
SMPD3Q9NY59 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 AC112907.3-201ENST00000577781 2400 ntBASIC19.4■□□□□ 0.7
SMPD3Q9NY59 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 AC010980.1-201ENST00000587192 1142 ntBASIC19.4■□□□□ 0.7
SMPD3Q9NY59 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD3Q9NY59 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMPD3Q9NY59 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.39■□□□□ 0.7
SMPD3Q9NY59 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMPD3Q9NY59 SMG8-203ENST00000578922 2178 ntBASIC19.39■□□□□ 0.69
SMPD3Q9NY59 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 MIR4508-201ENST00000584178 70 ntBASIC19.38■□□□□ 0.69
SMPD3Q9NY59 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD3Q9NY59 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD3Q9NY59 AC007225.1-201ENST00000566331 1836 ntBASIC19.37■□□□□ 0.69
SMPD3Q9NY59 AL162377.1-201ENST00000618844 1793 ntBASIC19.37■□□□□ 0.69
SMPD3Q9NY59 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMPD3Q9NY59 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD3Q9NY59 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD3Q9NY59 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD3Q9NY59 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD3Q9NY59 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.35■□□□□ 0.69
SMPD3Q9NY59 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.35■□□□□ 0.69
SMPD3Q9NY59 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms