Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 UNC93B8-201ENST00000511903 705 ntBASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 OR7E47P-201ENST00000546390 1422 ntBASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 LINC01521-201ENST00000504184 1943 ntBASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C12orf4Q9NQ89 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C12orf4Q9NQ89 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 pRNA.6-201ENST00000610482 90 ntBASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 pRNA.5-201ENST00000612139 90 ntBASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 pRNA.11-201ENST00000618423 90 ntBASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 pRNA.13-201ENST00000619112 90 ntBASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 AC068587.7-201ENST00000641602 218 ntBASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
C12orf4Q9NQ89 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 AC006455.2-201ENST00000429931 906 ntBASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C12orf4Q9NQ89 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 KRT16P3-201ENST00000439127 1283 ntBASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C12orf4Q9NQ89 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms