Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 AC138907.5-202ENST00000569484 235 ntBASIC17.88■□□□□ 0.45
GCM1Q9NP62 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.87■□□□□ 0.45
GCM1Q9NP62 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 AP001160.3-201ENST00000601484 763 ntBASIC17.87■□□□□ 0.45
GCM1Q9NP62 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
GCM1Q9NP62 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCM1Q9NP62 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCM1Q9NP62 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCM1Q9NP62 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCM1Q9NP62 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCM1Q9NP62 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 AC137761.2-201ENST00000561729 223 ntBASIC17.86■□□□□ 0.45
GCM1Q9NP62 AC145350.3-201ENST00000569033 163 ntBASIC17.86■□□□□ 0.45
GCM1Q9NP62 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 AC092666.2-201ENST00000613287 246 ntBASIC17.86■□□□□ 0.45
GCM1Q9NP62 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GCM1Q9NP62 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GCM1Q9NP62 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.85■□□□□ 0.45
GCM1Q9NP62 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.85■□□□□ 0.45
GCM1Q9NP62 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 AC010141.2-201ENST00000452426 721 ntBASIC17.85■□□□□ 0.45
GCM1Q9NP62 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.85■□□□□ 0.45
GCM1Q9NP62 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.85■□□□□ 0.45
GCM1Q9NP62 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCM1Q9NP62 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
GCM1Q9NP62 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.84■□□□□ 0.45
GCM1Q9NP62 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
GCM1Q9NP62 FBXW4P1-201ENST00000426721 2239 ntBASIC17.84■□□□□ 0.45
GCM1Q9NP62 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCM1Q9NP62 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.83■□□□□ 0.45
GCM1Q9NP62 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GCM1Q9NP62 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.83■□□□□ 0.45
GCM1Q9NP62 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.83■□□□□ 0.45
GCM1Q9NP62 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GCM1Q9NP62 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.83■□□□□ 0.45
GCM1Q9NP62 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 AC016769.1-201ENST00000409132 1010 ntBASIC17.83■□□□□ 0.44
GCM1Q9NP62 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCM1Q9NP62 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GCM1Q9NP62 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 829.3 ms