Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 AC005181.1-201ENST00000604782 1256 ntBASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 AC008175.2-201ENST00000612840 297 ntBASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 AL138781.1-201ENST00000566567 1274 ntBASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.81■□□□□ 0.6
KIAA1549Q9HCM3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 AC142086.2-201ENST00000569753 217 ntBASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KIAA1549Q9HCM3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KIAA1549Q9HCM3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 AL121832.2-201ENST00000610979 668 ntBASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.78■□□□□ 0.6
KIAA1549Q9HCM3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KIAA1549Q9HCM3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KIAA1549Q9HCM3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KIAA1549Q9HCM3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KIAA1549Q9HCM3 AC016405.3-201ENST00000607710 860 ntBASIC18.77■□□□□ 0.6
KIAA1549Q9HCM3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KIAA1549Q9HCM3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
KIAA1549Q9HCM3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KIAA1549Q9HCM3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
KIAA1549Q9HCM3 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.77■□□□□ 0.59
KIAA1549Q9HCM3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
KIAA1549Q9HCM3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 AC007322.4-201ENST00000509611 723 ntBASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 AC083906.2-201ENST00000511578 360 ntBASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KIAA1549Q9HCM3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms