Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 AC026271.2-201ENST00000428091 497 ntBASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 RARRES2P6-201ENST00000567333 442 ntBASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 TERF1P2-201ENST00000583350 1212 ntBASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.29■□□□□ 0.84
CLK4Q9HAZ1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 AC244015.2-201ENST00000616358 1861 ntBASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK4Q9HAZ1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK4Q9HAZ1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLK4Q9HAZ1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLK4Q9HAZ1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLK4Q9HAZ1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 AC055733.4-201ENST00000638462 1354 ntBASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK4Q9HAZ1 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms