Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 LINC02228-203ENST00000641970 1355 ntBASIC20.03■□□□□ 0.8
BRF2Q9HAW0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 AP004607.4-201ENST00000530158 1459 ntBASIC20.03■□□□□ 0.8
BRF2Q9HAW0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.02■□□□□ 0.8
BRF2Q9HAW0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.02■□□□□ 0.8
BRF2Q9HAW0 AC123595.1-201ENST00000440769 1046 ntBASIC20.02■□□□□ 0.8
BRF2Q9HAW0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF2Q9HAW0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRF2Q9HAW0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
BRF2Q9HAW0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRF2Q9HAW0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 AC008175.2-201ENST00000612840 297 ntBASIC20.01■□□□□ 0.79
BRF2Q9HAW0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
BRF2Q9HAW0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20■□□□□ 0.79
BRF2Q9HAW0 AC061975.6-201ENST00000579045 1553 ntBASIC20■□□□□ 0.79
BRF2Q9HAW0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20■□□□□ 0.79
BRF2Q9HAW0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
BRF2Q9HAW0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20■□□□□ 0.79
BRF2Q9HAW0 AC138907.5-202ENST00000569484 235 ntBASIC20■□□□□ 0.79
BRF2Q9HAW0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF2Q9HAW0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BRF2Q9HAW0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 AC006128.1-201ENST00000624704 1661 ntBASIC19.98■□□□□ 0.79
BRF2Q9HAW0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 YBX1P1-201ENST00000445822 960 ntBASIC19.98■□□□□ 0.79
BRF2Q9HAW0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF2Q9HAW0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms