Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 AC011767.1-201ENST00000617410 1153 ntBASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.2■□□□□ 0.99
ATP13A3Q9H7F0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 AC244015.2-201ENST00000616358 1861 ntBASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 MFSD11-216ENST00000590393 1141 ntBASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A3Q9H7F0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A3Q9H7F0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 AC080038.1-201ENST00000611274 1154 ntBASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A3Q9H7F0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A3Q9H7F0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 AC010536.3-201ENST00000620306 533 ntBASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms