Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 CYP2T3P-201ENST00000601990 817 ntBASIC22.3■■□□□ 1.16
NSUN3Q9H649 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NSUN3Q9H649 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.3■■□□□ 1.16
NSUN3Q9H649 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
NSUN3Q9H649 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
NSUN3Q9H649 AC092068.2-201ENST00000590491 1708 ntBASIC22.29■■□□□ 1.16
NSUN3Q9H649 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.29■■□□□ 1.16
NSUN3Q9H649 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NSUN3Q9H649 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
NSUN3Q9H649 AC211429.1-201ENST00000415277 523 ntBASIC22.29■■□□□ 1.16
NSUN3Q9H649 REXO1L12P-201ENST00000622156 912 ntBASIC22.29■■□□□ 1.16
NSUN3Q9H649 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.29■■□□□ 1.16
NSUN3Q9H649 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NSUN3Q9H649 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 SNORA78-201ENST00000459373 127 ntBASIC22.28■■□□□ 1.16
NSUN3Q9H649 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 Z99916.2-201ENST00000604037 246 ntBASIC22.28■■□□□ 1.16
NSUN3Q9H649 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NSUN3Q9H649 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.28■■□□□ 1.16
NSUN3Q9H649 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NSUN3Q9H649 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
NSUN3Q9H649 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
NSUN3Q9H649 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NSUN3Q9H649 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NSUN3Q9H649 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NSUN3Q9H649 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 RN7SL471P-201ENST00000580476 299 ntBASIC22.26■■□□□ 1.15
NSUN3Q9H649 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 FAM21FP-204ENST00000608637 956 ntBASIC22.26■■□□□ 1.15
NSUN3Q9H649 AC100791.3-201ENST00000617619 330 ntBASIC22.26■■□□□ 1.15
NSUN3Q9H649 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NSUN3Q9H649 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.26■■□□□ 1.15
NSUN3Q9H649 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
NSUN3Q9H649 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.25■■□□□ 1.15
NSUN3Q9H649 AC061975.6-201ENST00000579045 1553 ntBASIC22.25■■□□□ 1.15
NSUN3Q9H649 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.25■■□□□ 1.15
NSUN3Q9H649 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NSUN3Q9H649 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 PNMA6B-201ENST00000538162 1200 ntBASIC22.25■■□□□ 1.15
NSUN3Q9H649 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 LINC01023-201ENST00000606054 436 ntBASIC22.25■■□□□ 1.15
NSUN3Q9H649 AC010331.1-201ENST00000611423 582 ntBASIC22.25■■□□□ 1.15
NSUN3Q9H649 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
NSUN3Q9H649 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NSUN3Q9H649 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NSUN3Q9H649 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NSUN3Q9H649 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
NSUN3Q9H649 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.24■■□□□ 1.15
NSUN3Q9H649 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.24■■□□□ 1.15
NSUN3Q9H649 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.24■■□□□ 1.15
NSUN3Q9H649 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NSUN3Q9H649 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NSUN3Q9H649 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NSUN3Q9H649 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NSUN3Q9H649 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms