Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.94■□□□□ 0.78
PIF1Q9H611 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
PIF1Q9H611 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
PIF1Q9H611 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PIF1Q9H611 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.94■□□□□ 0.78
PIF1Q9H611 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.94■□□□□ 0.78
PIF1Q9H611 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.94■□□□□ 0.78
PIF1Q9H611 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.94■□□□□ 0.78
PIF1Q9H611 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PIF1Q9H611 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PIF1Q9H611 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PIF1Q9H611 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.93■□□□□ 0.78
PIF1Q9H611 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 SRD5A1P1-201ENST00000442297 786 ntBASIC19.93■□□□□ 0.78
PIF1Q9H611 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PIF1Q9H611 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.93■□□□□ 0.78
PIF1Q9H611 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.93■□□□□ 0.78
PIF1Q9H611 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PIF1Q9H611 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PIF1Q9H611 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PIF1Q9H611 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PIF1Q9H611 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PIF1Q9H611 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PIF1Q9H611 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PIF1Q9H611 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PIF1Q9H611 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PIF1Q9H611 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PIF1Q9H611 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PIF1Q9H611 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PIF1Q9H611 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PIF1Q9H611 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PIF1Q9H611 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
PIF1Q9H611 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.91■□□□□ 0.78
PIF1Q9H611 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.91■□□□□ 0.78
PIF1Q9H611 AC131281.2-201ENST00000520478 145 ntBASIC19.91■□□□□ 0.78
PIF1Q9H611 AL034346.1-201ENST00000568244 1277 ntBASIC19.91■□□□□ 0.78
PIF1Q9H611 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.91■□□□□ 0.78
PIF1Q9H611 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.91■□□□□ 0.78
PIF1Q9H611 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PIF1Q9H611 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.91■□□□□ 0.78
PIF1Q9H611 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PIF1Q9H611 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PIF1Q9H611 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PIF1Q9H611 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PIF1Q9H611 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.9■□□□□ 0.78
PIF1Q9H611 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 DUX4L19-201ENST00000557448 1267 ntBASIC19.9■□□□□ 0.78
PIF1Q9H611 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.9■□□□□ 0.78
PIF1Q9H611 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 PLK5-205ENST00000642079 1969 ntBASIC19.9■□□□□ 0.78
PIF1Q9H611 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PIF1Q9H611 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.9■□□□□ 0.78
PIF1Q9H611 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
PIF1Q9H611 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.89■□□□□ 0.77
PIF1Q9H611 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms