Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 MFSD11-216ENST00000590393 1141 ntBASIC24.8■■□□□ 1.56
RNF41Q9H4P4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 AC011767.1-201ENST00000617410 1153 ntBASIC24.8■■□□□ 1.56
RNF41Q9H4P4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF41Q9H4P4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 Z98882.1-201ENST00000622160 2253 ntBASIC24.79■■□□□ 1.56
RNF41Q9H4P4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF41Q9H4P4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF41Q9H4P4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF41Q9H4P4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 AC010536.3-201ENST00000620306 533 ntBASIC24.76■■□□□ 1.55
RNF41Q9H4P4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF41Q9H4P4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 AC080038.1-201ENST00000611274 1154 ntBASIC24.75■■□□□ 1.55
RNF41Q9H4P4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF41Q9H4P4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 AC245052.3-201ENST00000450182 901 ntBASIC24.74■■□□□ 1.55
RNF41Q9H4P4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 AC243732.1-201ENST00000612648 864 ntBASIC24.74■■□□□ 1.55
RNF41Q9H4P4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.74■■□□□ 1.55
RNF41Q9H4P4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
RNF41Q9H4P4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RNF41Q9H4P4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF41Q9H4P4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF41Q9H4P4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF41Q9H4P4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.73■■□□□ 1.55
RNF41Q9H4P4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms