Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
UBQLN3Q9H347 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.39■□□□□ 0.7
UBQLN3Q9H347 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
UBQLN3Q9H347 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN3Q9H347 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN3Q9H347 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 AF106564.1-201ENST00000607058 2553 ntBASIC19.39■□□□□ 0.69
UBQLN3Q9H347 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN3Q9H347 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN3Q9H347 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 AC137761.2-201ENST00000561729 223 ntBASIC19.37■□□□□ 0.69
UBQLN3Q9H347 AC145350.3-201ENST00000569033 163 ntBASIC19.37■□□□□ 0.69
UBQLN3Q9H347 AC104187.1-201ENST00000607510 612 ntBASIC19.37■□□□□ 0.69
UBQLN3Q9H347 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN3Q9H347 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN3Q9H347 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 AC004911.1-201ENST00000416316 871 ntBASIC19.35■□□□□ 0.69
UBQLN3Q9H347 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN3Q9H347 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms