Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AL121906.2-201ENST00000621597 723 ntBASIC20.34■□□□□ 0.85
SPTBN4Q9H254 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPTBN4Q9H254 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 LINC01568-207ENST00000641790 1380 ntBASIC20.33■□□□□ 0.85
SPTBN4Q9H254 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPTBN4Q9H254 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SPTBN4Q9H254 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 OR7E47P-201ENST00000546390 1422 ntBASIC20.32■□□□□ 0.84
SPTBN4Q9H254 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 BX664615.1-201ENST00000443558 458 ntBASIC20.32■□□□□ 0.84
SPTBN4Q9H254 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTBN4Q9H254 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 SLC25A3P1-201ENST00000443844 931 ntBASIC20.31■□□□□ 0.84
SPTBN4Q9H254 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 AC100791.3-201ENST00000617619 330 ntBASIC20.31■□□□□ 0.84
SPTBN4Q9H254 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.31■□□□□ 0.84
SPTBN4Q9H254 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SPTBN4Q9H254 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
SPTBN4Q9H254 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 LINC00543-201ENST00000567234 1845 ntBASIC20.29■□□□□ 0.84
SPTBN4Q9H254 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 AP000593.1-201ENST00000393668 712 ntBASIC20.29■□□□□ 0.84
SPTBN4Q9H254 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTBN4Q9H254 AC006538.3-201ENST00000612495 578 ntBASIC20.29■□□□□ 0.84
SPTBN4Q9H254 AC145676.1-201ENST00000514988 2004 ntBASIC20.28■□□□□ 0.84
SPTBN4Q9H254 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 AC104076.2-201ENST00000448912 469 ntBASIC20.28■□□□□ 0.84
SPTBN4Q9H254 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 AC079630.1-202ENST00000618127 1840 ntBASIC20.28■□□□□ 0.84
SPTBN4Q9H254 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms