Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 AC006128.1-201ENST00000624704 1661 ntBASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 AC073314.1-201ENST00000568729 2216 ntBASIC17.66■□□□□ 0.42
HDHD3Q9BSH5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 AL391422.3-201ENST00000603791 2761 ntBASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDHD3Q9BSH5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.64■□□□□ 0.42
HDHD3Q9BSH5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.64■□□□□ 0.42
HDHD3Q9BSH5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 MIR4767-201ENST00000582827 78 ntBASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDHD3Q9BSH5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 PCDHAC2-203ENST00000615316 3011 ntBASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HDHD3Q9BSH5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 AL136116.3-201ENST00000402907 1138 ntBASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 AP005212.1-201ENST00000581547 1997 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms