Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BARD1Q99728 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BARD1Q99728 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20■□□□□ 0.79
BARD1Q99728 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BARD1Q99728 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BARD1Q99728 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20■□□□□ 0.79
BARD1Q99728 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BARD1Q99728 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20■□□□□ 0.79
BARD1Q99728 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20■□□□□ 0.79
BARD1Q99728 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20■□□□□ 0.79
BARD1Q99728 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BARD1Q99728 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 AP004607.4-201ENST00000530158 1459 ntBASIC19.99■□□□□ 0.79
BARD1Q99728 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.99■□□□□ 0.79
BARD1Q99728 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BARD1Q99728 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.99■□□□□ 0.79
BARD1Q99728 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.99■□□□□ 0.79
BARD1Q99728 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BARD1Q99728 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
BARD1Q99728 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
BARD1Q99728 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
BARD1Q99728 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.98■□□□□ 0.79
BARD1Q99728 AC137761.2-201ENST00000561729 223 ntBASIC19.98■□□□□ 0.79
BARD1Q99728 AC145350.3-201ENST00000569033 163 ntBASIC19.98■□□□□ 0.79
BARD1Q99728 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
BARD1Q99728 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
BARD1Q99728 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.98■□□□□ 0.79
BARD1Q99728 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.98■□□□□ 0.79
BARD1Q99728 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BARD1Q99728 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.97■□□□□ 0.79
BARD1Q99728 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
BARD1Q99728 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.97■□□□□ 0.79
BARD1Q99728 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.97■□□□□ 0.79
BARD1Q99728 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.97■□□□□ 0.79
BARD1Q99728 AC026471.6-201ENST00000622954 1905 ntBASIC19.97■□□□□ 0.79
BARD1Q99728 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.97■□□□□ 0.79
BARD1Q99728 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.97■□□□□ 0.79
BARD1Q99728 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
BARD1Q99728 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.97■□□□□ 0.79
BARD1Q99728 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
BARD1Q99728 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.97■□□□□ 0.79
BARD1Q99728 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BARD1Q99728 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.96■□□□□ 0.79
BARD1Q99728 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BARD1Q99728 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
BARD1Q99728 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.96■□□□□ 0.79
BARD1Q99728 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.96■□□□□ 0.79
BARD1Q99728 AC016769.1-201ENST00000409132 1010 ntBASIC19.96■□□□□ 0.79
BARD1Q99728 AC026185.1-201ENST00000445748 174 ntBASIC19.96■□□□□ 0.79
BARD1Q99728 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.96■□□□□ 0.79
BARD1Q99728 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.96■□□□□ 0.79
BARD1Q99728 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BARD1Q99728 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BARD1Q99728 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.96■□□□□ 0.79
BARD1Q99728 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BARD1Q99728 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
BARD1Q99728 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BARD1Q99728 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
BARD1Q99728 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BARD1Q99728 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.96■□□□□ 0.79
BARD1Q99728 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms