Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL12A1Q99715 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.53■□□□□ 0.56
COL12A1Q99715 AC124016.1-201ENST00000609552 612 ntBASIC18.53■□□□□ 0.56
COL12A1Q99715 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL12A1Q99715 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL12A1Q99715 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.53■□□□□ 0.56
COL12A1Q99715 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL12A1Q99715 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL12A1Q99715 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.53■□□□□ 0.56
COL12A1Q99715 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.53■□□□□ 0.56
COL12A1Q99715 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL12A1Q99715 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.53■□□□□ 0.56
COL12A1Q99715 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.53■□□□□ 0.56
COL12A1Q99715 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.53■□□□□ 0.56
COL12A1Q99715 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.53■□□□□ 0.56
COL12A1Q99715 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL12A1Q99715 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL12A1Q99715 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.53■□□□□ 0.56
COL12A1Q99715 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL12A1Q99715 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL12A1Q99715 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.53■□□□□ 0.56
COL12A1Q99715 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL12A1Q99715 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL12A1Q99715 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL12A1Q99715 AC138932.3-201ENST00000567634 1902 ntBASIC18.52■□□□□ 0.56
COL12A1Q99715 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL12A1Q99715 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL12A1Q99715 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL12A1Q99715 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.52■□□□□ 0.56
COL12A1Q99715 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.52■□□□□ 0.56
COL12A1Q99715 AP003733.4-201ENST00000623785 1697 ntBASIC18.52■□□□□ 0.56
COL12A1Q99715 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL12A1Q99715 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL12A1Q99715 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL12A1Q99715 AC113347.1-201ENST00000413321 391 ntBASIC18.52■□□□□ 0.55
COL12A1Q99715 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL12A1Q99715 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL12A1Q99715 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL12A1Q99715 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL12A1Q99715 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.52■□□□□ 0.55
COL12A1Q99715 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.52■□□□□ 0.55
COL12A1Q99715 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.52■□□□□ 0.55
COL12A1Q99715 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 AL023875.1-201ENST00000640777 796 ntBASIC18.51■□□□□ 0.55
COL12A1Q99715 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL12A1Q99715 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.51■□□□□ 0.55
COL12A1Q99715 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.51■□□□□ 0.55
COL12A1Q99715 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
COL12A1Q99715 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.51■□□□□ 0.55
COL12A1Q99715 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.51■□□□□ 0.55
COL12A1Q99715 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.51■□□□□ 0.55
COL12A1Q99715 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.51■□□□□ 0.55
COL12A1Q99715 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.51■□□□□ 0.55
COL12A1Q99715 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL12A1Q99715 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.51■□□□□ 0.55
COL12A1Q99715 AC026396.1-201ENST00000419388 421 ntBASIC18.51■□□□□ 0.55
COL12A1Q99715 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.51■□□□□ 0.55
COL12A1Q99715 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
COL12A1Q99715 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COL12A1Q99715 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL12A1Q99715 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
COL12A1Q99715 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.5■□□□□ 0.55
COL12A1Q99715 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL12A1Q99715 KRT126P-201ENST00000549467 1181 ntBASIC18.5■□□□□ 0.55
COL12A1Q99715 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.5■□□□□ 0.55
COL12A1Q99715 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL12A1Q99715 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL12A1Q99715 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.5■□□□□ 0.55
COL12A1Q99715 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.5■□□□□ 0.55
COL12A1Q99715 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL12A1Q99715 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COL12A1Q99715 LINC01960-201ENST00000563759 1884 ntBASIC18.5■□□□□ 0.55
COL12A1Q99715 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL12A1Q99715 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL12A1Q99715 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.5■□□□□ 0.55
COL12A1Q99715 AP004607.7-201ENST00000527152 1677 ntBASIC18.5■□□□□ 0.55
COL12A1Q99715 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.49■□□□□ 0.55
COL12A1Q99715 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.49■□□□□ 0.55
COL12A1Q99715 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.49■□□□□ 0.55
COL12A1Q99715 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL12A1Q99715 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.49■□□□□ 0.55
COL12A1Q99715 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
COL12A1Q99715 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms